Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_00100 and BSU00600

See DNA alignment / Visit BSNT_00100 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:16:00
# Commandline: needle
#    -asequence pep-align/BSNT_00100___yabP.1.22522.seq
#    -bsequence pep-align/BSU00600___yabP.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00100___yabP-BSU00600___yabP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00100___yabP-BSU00600___yabP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00100___yabP
# 2: BSU00600___yabP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 100
# Identity:     100/100 (100.0%)
# Similarity:   100/100 (100.0%)
# Gaps:           0/100 ( 0.0%)
# Score: 512.0
# 
#
#=======================================

BSNT_00100___      1 MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00600___ya      1 MNSYYDQKGSSSVPEQHDVTMKGRKHLDISGVKHVESFDNEEFLLETVMG     50

BSNT_00100___     51 MLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00600___ya     51 MLSVRGQNLQMKNLDVEKGIVSIKGRVFDLVYLDEQQGDKAKGFFSKLFK    100


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.