Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00087 and BSU00500

See DNA alignment / Visit BSNT_00087 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:15:57
# Commandline: needle
#    -asequence pep-align/BSNT_00087___gcaD.1.22522.seq
#    -bsequence pep-align/BSU00500___gcaD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00087___gcaD-BSU00500___gcaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00087___gcaD-BSU00500___gcaD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00087___gcaD
# 2: BSU00500___gcaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity:     454/456 (99.6%)
# Similarity:   455/456 (99.8%)
# Gaps:           0/456 ( 0.0%)
# Score: 2316.0
# 
#
#=======================================

BSNT_00087___      1 MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLV     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc      1 MDKRFAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDEALKLSLSKLV     50

BSNT_00087___     51 TIVGHGAEEVKKQLGDKSEYALQAEQLGTAHAVKQAQPFLADEKGVTIVI    100
                     ||||||||||||||||||||||||:|||||||||||||||||||||||||
BSU00500___gc     51 TIVGHGAEEVKKQLGDKSEYALQAKQLGTAHAVKQAQPFLADEKGVTIVI    100

BSNT_00087___    101 CGDTPLLTAETMEQMLKEHAQREAKATILTAVAEDPTGYGRIIRSENGAV    150
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU00500___gc    101 CGDTPLLTAETMEQMLKEHTQREAKATILTAVAEDPTGYGRIIRSENGAV    150

BSNT_00087___    151 QKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLP    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    151 QKIVEHKDASEEERLVTEINTGTYCFDNEALFRAIDQVSNDNAQGEYYLP    200

BSNT_00087___    201 DVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERINKRHMQ    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    201 DVIEILKNEGETVAAYQTGNFQETLGVNDRVALSQAEQFMKERINKRHMQ    250

BSNT_00087___    251 NGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIM    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    251 NGVTLIDPMNTYISPDAVIGSDTVIYPGTVIKGEVQIGEDTIIGPHTEIM    300

BSNT_00087___    301 NSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEI    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    301 NSAIGSRTVIKQSVVNHSKVGNDVNIGPFAHIRPDSVIGNEVKIGNFVEI    350

BSNT_00087___    351 KKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    351 KKTQFGDRSKASHLSYVGDAEVGTDVNLGCGSITVNYDGKNKYLTKIEDG    400

BSNT_00087___    401 AFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYV    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU00500___gc    401 AFIGCNSNLVAPVTVGEGAYVAAGSTVTEDVPGKALAIARARQVNKDDYV    450

BSNT_00087___    451 KNIHKK    456
                     ||||||
BSU00500___gc    451 KNIHKK    456


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