Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06290 and BPUM_3734
See
DNA alignment /
Visit
BSNT_06290 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:43
# Commandline: needle
# -asequence pep-align/BSNT_06290___jag.1.24716.seq
# -bsequence pep-align/BPUM_3734___jag.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06290___jag-BPUM_3734___jag.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06290___jag-BPUM_3734___jag.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06290___jag
# 2: BPUM_3734___jag
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 208
# Identity: 102/208 (49.0%)
# Similarity: 154/208 (74.0%)
# Gaps: 1/208 ( 0.5%)
# Score: 553.0
#
#
#=======================================
BSNT_06290___ 1 MRNVTAAGRNVDEAVQSGLQELGLTKDKVEIIIIEEGNKGFLGIFGKKPA 50
|:.:||.||.::|||.|||:::.|.|::|:|.|::||||||||:|||:.|
BPUM_3734___j 1 MKEITAVGRTIEEAVDSGLKQIQLLKEEVDITIVDEGNKGFLGLFGKRQA 50
BSNT_06290___ 51 IVKLVEKIDPIQQAKLYLQTIAEAIAGKSDVTVQESKKTVRYHITGEKAA 100
:||||||.:.::.|..||..|.::|..|:.:..::..|.:.:||.|:|.:
BPUM_3734___j 51 VVKLVEKRNALKLATQYLDNIVKSIDPKAKIVSKQEPKKISFHIDGDKTS 100
BSNT_06290___ 101 LLIGKRGQTLNALETLTQLALNRYPGQYKNVTVDAENYRLKRKETLSQLA 150
|:||||||||.:||||.||..|||..||.::|:|..:||.||:|.|.|.|
BPUM_3734___j 101 LMIGKRGQTLYSLETLVQLVFNRYSDQYHHITIDIGDYRKKRQEALEQYA 150
BSNT_06290___ 151 IKLADQVLKTKKSIQLEPMPSSERKIIHDTLSGYANHQIKTYSMGEGENR 200
:|.|::|||||:.:.||||||:|||:||||::.::. ::.|.|...|..|
BPUM_3734___j 151 VKTANKVLKTKRKVHLEPMPSNERKVIHDTIATFSK-ELATASEDTGSKR 199
BSNT_06290___ 201 HLVISHKR 208
|:|:.:|:
BPUM_3734___j 200 HVVVLYKK 207
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.