Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06277 and BPUM_3725
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:42
# Commandline: needle
# -asequence pep-align/BSNT_06277___yyaD.1.24716.seq
# -bsequence pep-align/BPUM_3725___yyaD.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06277___yyaD-BPUM_3725___yyaD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06277___yyaD-BPUM_3725___yyaD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06277___yyaD
# 2: BPUM_3725___yyaD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 353
# Identity: 237/353 (67.1%)
# Similarity: 290/353 (82.2%)
# Gaps: 16/353 ( 4.5%)
# Score: 1294.0
#
#
#=======================================
BSNT_06277___ 1 --MLWRAGMKWMLLILGSLIGAGYASGQEIWQFFGAESGLAIVLFTIMFI 48
::|:||.:|.|||||||||||||||||||||||.:|||||:|||:||:
BPUM_3725___y 1 MMIVWKAGSRWTLLILGSLIGAGYASGQEIWQFFGIDSGLAILLFTLMFM 50
BSNT_06277___ 49 FSSYIVMKISFKVQSTHFLPVLEHLMGPWLAKIYDVLIIFYLFSTTMVMI 98
.|:|:|:|||::|::.||:||||.|:||||||:|||||:.|||:||.|||
BPUM_3725___y 51 LSTYVVLKISYEVRADHFVPVLERLVGPWLAKVYDVLIVLYLFTTTTVMI 100
BSNT_06277___ 99 AGGGVTLQMYKLPFWWGITLICIVTVCLFLWDVKGILSINSILIPVLVAG 148
|||||||:||.:|||.||...|:.:..:|.|||||:||:|:.:||:||||
BPUM_3725___y 101 AGGGVTLEMYHVPFWVGIGAFCLFSFMIFFWDVKGLLSVNAFIIPILVAG 150
BSNT_06277___ 149 LLYALISFQSTHHHTWTIDLSQQYNWPASITFTSLNILSVVAILSSVGKE 198
|:||.:.:...|.|.|.||..|||||||||.|.|||||||||:|||||||
BPUM_3725___y 151 LIYAFVFYYMNHDHMWRIDFGQQYNWPASIVFASLNILSVVAVLSSVGKE 200
BSNT_06277___ 199 MKGLGEAKIASVASGLIFGVISFVYNETLVELAGSLSQFEIPLFAVLEGA 248
||||||||:||:.|||||||||:||||.||:::||||...||||.|||||
BPUM_3725___y 201 MKGLGEAKVASILSGLIFGVISYVYNEILVDISGSLSAEGIPLFTVLEGA 250
BSNT_06277___ 249 PYFLFLCMTAVLCLAIYTTTVAGLLGLSSRLMAFIHMPRWMIVLILLVLM 298
|..||:.||.||||||||||.|||.|||||:::|:.:|||::|||:|:||
BPUM_3725___y 251 PTSLFVFMTVVLCLAIYTTTAAGLFGLSSRMLSFVPLPRWLVVLIMLLLM 300
BSNT_06277___ 299 VPFTSFGFSDLIAFLYPIYGMLNLYLLVCLLLYPILSKWK---------- 338
.|.||.||:||||||||||.:|||||||||:||||||| |
BPUM_3725___y 301 APLTSLGFADLIAFLYPIYSLLNLYLLVCLMLYPILSK-KIFSHPKNYID 349
BSNT_06277___ 338 --- 338
BPUM_3725___y 350 KIK 352
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