Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_03185 and BPUM_3714
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:40
# Commandline: needle
# -asequence pep-align/BSNT_03185___yodD.1.24716.seq
# -bsequence pep-align/BPUM_3714.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_03185___yodD-BPUM_3714.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_03185___yodD-BPUM_3714.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03185___yodD
# 2: BPUM_3714
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 203
# Identity: 120/203 (59.1%)
# Similarity: 153/203 (75.4%)
# Gaps: 4/203 ( 2.0%)
# Score: 642.5
#
#
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BSNT_03185___ 1 -MKHIYEKGTSDN--VLLLLHGTGGNEHDLLSLGRFIDPNAHLLGVRGSV 47
|||::.||.:|. ||||||||||.|.|||.|...:|.:|.:|.|||:|
BPUM_3714 1 MMKHLFRKGKNDQRPVLLLLHGTGGTEEDLLPLADLVDADASVLSVRGNV 50
BSNT_03185___ 48 LENGMPRFFKRLSEGVFDEKDLVVRTRELKDFIDEAAETHQFDRGKVIAV 97
|||||||||:||:||:|||:||:.||.||..||::||..:.|||..|:|:
BPUM_3714 51 LENGMPRFFRRLAEGIFDEQDLIERTEELYTFIEDAAGKYGFDRHNVVAL 100
BSNT_03185___ 98 GYSNGANIAASLLFHYKDVLKGAILHHPMVPIRGIELPDMAGLPVFIGAG 147
|||||||||.||||||:|.||||||||||||.||:.||.:||..|||.||
BPUM_3714 101 GYSNGANIAGSLLFHYEDALKGAILHHPMVPRRGVSLPSLAGKQVFIAAG 150
BSNT_03185___ 148 KYDPLCTKEESEELYRYLRDSGASASVFWQDGGHQLTQHEAEQAREWYKE 197
:.||:|..|||:||.:.|:.:|||.::.|::.|||||:.|.:.|..||:.
BPUM_3714 151 ENDPMCRPEESQELEQLLQGAGASVTLHWENRGHQLTREEVDAAALWYRR 200
BSNT_03185___ 198 AIV 200
..
BPUM_3714 201 QF- 202
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