Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_06222 and BPUM_3705

See DNA alignment / Visit BSNT_06222 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:40
# Commandline: needle
#    -asequence pep-align/BSNT_06222___rplI.1.24716.seq
#    -bsequence pep-align/BPUM_3705___rplI.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_06222___rplI-BPUM_3705___rplI.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06222___rplI-BPUM_3705___rplI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06222___rplI
# 2: BPUM_3705___rplI
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 149
# Identity:     125/149 (83.9%)
# Similarity:   136/149 (91.3%)
# Gaps:           0/149 ( 0.0%)
# Score: 635.0
# 
#
#=======================================

BSNT_06222___      1 MKVIFLQDVKGKGKKGEVKNVADGYAHNFLIKKGLAVEANASNISALNGQ     50
                     ||||||:|||||||||||||||||||||||||:|||||||.:|:|||.||
BPUM_3705___r      1 MKVIFLKDVKGKGKKGEVKNVADGYAHNFLIKQGLAVEANPTNLSALEGQ     50

BSNT_06222___     51 KQKEKKEAIAELEQAKSLKETLEKLTVELSAKSGEGGRLFGSVTSKQITE    100
                     |.||||.|:.||||||.||||||.|||||:||||||||||||:|||||.:
BPUM_3705___r     51 KNKEKKNAVQELEQAKQLKETLEALTVELTAKSGEGGRLFGSITSKQIAD    100

BSNT_06222___    101 QLQKDHNIKVDKRKLELPDGIRALGYTNVPVKLHPEVQAVLKVHVKEEA    149
                     :|||||.|||||||:||.|.|||||||||||||||||||.|||||.|:|
BPUM_3705___r    101 KLQKDHQIKVDKRKIELNDAIRALGYTNVPVKLHPEVQATLKVHVTEQA    149


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.