Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_00363 and BPUM_3699

See DNA alignment / Visit BSNT_00363 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:15
# Commandline: needle
#    -asequence pep-align/BSNT_00363___ybdN.1.24716.seq
#    -bsequence pep-align/BPUM_3699___ybdN.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_00363___ybdN-BPUM_3699___ybdN.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00363___ybdN-BPUM_3699___ybdN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00363___ybdN
# 2: BPUM_3699___ybdN
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 290
# Identity:     168/290 (57.9%)
# Similarity:   215/290 (74.1%)
# Gaps:          10/290 ( 3.4%)
# Score: 839.0
# 
#
#=======================================

BSNT_00363___      1 ----MVKKWLIPFAVMLSVLFTFTYSASAAGVTAITGNNSFDTAMPIGYW     46
                         :.|::|:| |::|.::.:|..|.||.  .|||||||.:||..:|||
BPUM_3699___y      1 MTNTIFKRFLLP-ALLLMLVTSFFASNSAE--AAITGNNSPNTASSMGYW     47

BSNT_00363___     47 KYKNIDTTILEAGQDEAYFTFTANKGEKVYVRSTYQSAYTGMKIEIYDKN     96
                     ||...|||||..|::|||:.||.||||:|||||:|...|||||||:|:..
BPUM_3699___y     48 KYSRPDTTILPEGENEAYYQFTINKGERVYVRSSYNKQYTGMKIEVYNSK     97

BSNT_00363___     97 RIPVSQGTEVINPNTFSSFIYAN-ADAQNTTDTFYVKVSRGTYTGNMYFT    145
                     ...|.  ||||||::.:.||:|| .|..:|::|::|||:|||||||||||
BPUM_3699___y     98 YTDVK--TEVINPDSVTPFIFANTGDVTSTSETYFVKVTRGTYTGNMYFT    145

BSNT_00363___    146 LSIEDRIKSGSGTFQFSGAAENKGNTSLSPSGSDSSVIKVDLTNQSGIPR    195
                     :||:||||||:|||.|:|||.|.|||||:..|.|||||.:|||..|.||:
BPUM_3699___y    146 VSIQDRIKSGNGTFNFTGAATNMGNTSLNFLGVDSSVISMDLTKNSSIPK    195

BSNT_00363___    196 DAIVTRVQTTATQTPSQGNTRHLIMTSENNEWRRALVNSSTSGSYDISLS    245
                     :|||..:.||:||:|:|||..|.:|...|..|..::|:|:|||||.|||.
BPUM_3699___y    196 NAIVKSISTTSTQSPNQGNVTHKLMADANKIWNESIVSSATSGSYRISLE    245

BSNT_00363___    246 DQLSVAKVWSFKYNTLATARSTMSNVKAKIDYEYDVTKQF    285
                     :||.||:.||||||..||||||||||||.|.||||||..|
BPUM_3699___y    246 NQLKVAQKWSFKYNAKATARSTMSNVKADIRYEYDVTDGF    285


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