Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00949 and BPUM_3568
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:38
# Commandline: needle
# -asequence pep-align/BSNT_00949.1.24716.seq
# -bsequence pep-align/BPUM_3568.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00949-BPUM_3568.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00949-BPUM_3568.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00949
# 2: BPUM_3568
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 456
# Identity: 210/456 (46.1%)
# Similarity: 285/456 (62.5%)
# Gaps: 11/456 ( 2.4%)
# Score: 1006.5
#
#
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BSNT_00949 1 MFHTRNSS-QNTAEFVLLDQLVEEDHLLRKIDKHIDFSFIIEKVKPYYSE 49
|...|... :|..|.|.||:||.||||:|||::.|||.||.:.||.:||.
BPUM_3568 1 MLSKREEERRNQLEVVALDELVPEDHLVRKIEQAIDFDFIYDLVKDHYSS 50
BSNT_00949 50 NKGRPSLDPLILFKMMFIGYLYGIRSERQLEKEIYYNMAYRWFLGLNIND 99
:.||||:||::|.||:.|.||:||||.||..|||..|:|||||:|...::
BPUM_3568 51 DNGRPSVDPVVLIKMVLIQYLFGIRSMRQTIKEIETNVAYRWFIGYGFSE 100
BSNT_00949 100 PVPHHSTISWNRRTRFKDTTIFQDIFDEIVLQAINHDMVGGRVLFTDSTH 149
.:||.||...|...||.||.:|:.||..|:.:|:...:|...:.|.||||
BPUM_3568 101 KIPHFSTFGKNYVRRFHDTDLFEQIFYRILREAMKKGLVDPSIAFIDSTH 150
BSNT_00949 150 LKANANKHKYTRKTIAQDTQNYIKDLNEAIQEDREEHGKKPLTA--KEEV 197
:||||||.|..:|.:..:|::|...|:|.|..||||||||||.. |||.
BPUM_3568 151 VKANANKKKLEKKIVRVETRSYQNQLHEEINIDREEHGKKPLPLQNKEET 200
BSNT_00949 198 KAEKEIRHSTTDPESGYLYRENKPEGFFYLDHRTTDMKYNIITDAYVTPG 247
|||:.|||||||||..::.:.:.|.|..|...|.| ..|..:.||.|
BPUM_3568 201 ---KEIKVSTTDPESGYYVKDEREKSFAYSFHTACDSK-GFILGSLVTGG 246
BSNT_00949 248 NVHDSVPYLDRLDHQIARFGFQVEAVALDSGYLTTPICKGLSDRQIFGVI 297
||||| ..||.|..::.....:...||:|:||.|..|.|.|.|::|..|:
BPUM_3568 247 NVHDS-RMLDSLVSKVTEKVGKPNVVAVDAGYKTPYIAKFLMDQEIRPVM 295
BSNT_00949 298 AHRRYHPIRGLFPKWKFHYDSEQDRYICPNHQTLTYSTTDRKGYRSYKSN 347
.:.|.....|...|.::.||:..|.|||||.|.|:|.||.|:||:.|.|:
BPUM_3568 296 PYTRPRTKAGYLKKNEYVYDAYFDCYICPNGQILSYRTTTREGYKQYVSD 345
BSNT_00949 348 PEICSSCPLLENCTKSKNRQKVITRHVWEDHKEKVRQNRLSVSGKNLYKK 397
.|:|.||..|:|||:|:|..|.|.||:|:|:.::....||:...||:|.|
BPUM_3568 346 SEVCESCSFLDNCTQSQNHTKQIHRHIWQDYLDEADNLRLTEINKNIYAK 395
BSNT_00949 398 RKEKIERSFADSKQLHGLRYCRLRGKRNVSEQVLLTAACQNMKKIATYLA 447
|||.|||.|||:|:.||:|:.:|||.:.||.|.:||.|..|:||:|.:..
BPUM_3568 396 RKETIERVFADAKEKHGMRWTKLRGLKKVSMQAMLTFAAMNLKKLANWTW 445
BSNT_00949 448 KQG--- 450
|..
BPUM_3568 446 KVPCPA 451
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