Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05982 and BPUM_3567

See DNA alignment / Visit BSNT_05982 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence pep-align/BSNT_05982___licT.1.24716.seq
#    -bsequence pep-align/BPUM_3567___licT1.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05982___licT-BPUM_3567___licT1.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05982___licT-BPUM_3567___licT1.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05982___licT
# 2: BPUM_3567___licT1
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 277
# Identity:     184/277 (66.4%)
# Similarity:   233/277 (84.1%)
# Gaps:           0/277 ( 0.0%)
# Score: 994.0
# 
#
#=======================================

BSNT_05982___      1 MKIAKVINNNVISVVNEQGKELVVMGRGLAFQKKSGDDVDEARIEKVFTL     50
                     |.|:|||||||:|..:::..|||:||||:||||||||.:||.||||||::
BPUM_3567___l      1 MIISKVINNNVVSAYDDEQHELVIMGRGIAFQKKSGDPIDEERIEKVFSI     50

BSNT_05982___     51 DNKDVSEKFKTLLYDIPIECMEVSEEIISYAKLQLGKKLNDSIYVSLTDH    100
                     .|||:||||||||||||||.|:|.|.||.:|:..|.|.|||||||:||||
BPUM_3567___l     51 QNKDISEKFKTLLYDIPIEYMQVCEAIIDHARTTLNKNLNDSIYVTLTDH    100

BSNT_05982___    101 INFAIQRNQKGLDIKNALLWETKRLYKDEFAIGKEALVMVKNKTGVSLPE    150
                     |.|||:|:|||:|||||||||.||||||||..|.|||.::::|..:.|||
BPUM_3567___l    101 ITFAIERHQKGMDIKNALLWEIKRLYKDEFMCGVEALRIIQDKLDIHLPE    150

BSNT_05982___    151 DEAGFIALHIVNAELNEEMPNIINITKVMQEILSIVKYHFKIEFNEESLH    200
                     |||||||:|||||||||||||:|.|||::|:||:||||||:|:.:||||:
BPUM_3567___l    151 DEAGFIAMHIVNAELNEEMPNVIQITKLIQDILNIVKYHFQIDLDEESLN    200

BSNT_05982___    201 YYRFVTHLKFFAQRLFNGTHMESQDDFLLDTVKEKYHRAYECTKKIQTYI    250
                     |:|||||||||.|||||.|.||:|::||.:.||||...|::|.:||..|:
BPUM_3567___l    201 YFRFVTHLKFFGQRLFNETQMENQNEFLYEVVKEKNTAAFQCAEKINDYV    250

BSNT_05982___    251 EREYEHKLTSDELLYLTIHIERVVKQA    277
                     ::||...|..||:||||:||:||:|:.
BPUM_3567___l    251 QKEYNRSLIEDEMLYLTLHIDRVIKRK    277


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.