Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01271 and BPUM_3515
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:51
# Commandline: needle
# -asequence pep-align/BSNT_01271___pel.1.24716.seq
# -bsequence pep-align/BPUM_3515___pelB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01271___pel-BPUM_3515___pelB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01271___pel-BPUM_3515___pelB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01271___pel
# 2: BPUM_3515___pelB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 448
# Identity: 124/448 (27.7%)
# Similarity: 188/448 (42.0%)
# Gaps: 134/448 (29.9%)
# Score: 363.5
#
#
#=======================================
BSNT_01271___ 1 -MKKV-MLAAALFLGL-----TPAGANAADLGHQTLGS------NDGWGA 37
.||| |||..|.:|| .|.|...|...:....| ..|:..
BPUM_3515___p 1 MKKKVPMLAGVLAVGLVTSLFAPNGEAKAAAKYPESPSIMANFNQQGFST 50
BSNT_01271___ 38 YSTGTTGGSKASSSNVYTVSNRNQLVSAL-GKETNTTPKIIYIKGTIDMN 86
.:.||||| ......||...|:|::|| .|..|...||: :.|||
BPUM_3515___p 51 LNGGTTGG---EGGKTVTVKTGNELLAALKSKGKNEKLKIV-VDGTI--- 93
BSNT_01271___ 87 VDDNLKPLGLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQK 136
.||.|...
BPUM_3515___p 94 -----------------------------------TPSNTSAN------- 101
BSNT_01271___ 137 NQKARVMVDIPANTTIVGSGTNAKVVGGNFQI-KSDNVIIRNIEFQDAYD 185
::.|....|.:|||.||..:..|...:: :::|:||||::...:
BPUM_3515___p 102 ----KIDVKDTNNVSIVGKGTKGEFNGIGIKVWRANNIIIRNLKIHHS-- 145
BSNT_01271___ 186 YFPQWDPTDGSSGNWNSQYDNITINGGT-HIWIDH----CTFNDGSRPDS 230
..|: .|.|.|.|.: ::|:|| .|.|.|.
BPUM_3515___p 146 ----------KIGD----KDAIGIEGASKNVWVDHNELYNTLNSGK---- 177
BSNT_01271___ 231 TSPKYYGRKYQHHDGQTDASNGANYITMSYNYYHDHDKSSIFGSSDSKTS 280
..:||..|..|.::|||.|:||.||..|:.:.|||| :
BPUM_3515___p 178 ----------DDYDGLFDVKNDSDYITFSWNYVHDSWKTMLMGSSD---N 214
BSNT_01271___ 281 DDGKLKITLHHNRYKNIVQRAPRVRFGQVHVYNNYYEG--STSSSSYPFS 328
|:...|||.|:||::|:..|.|.:|||:.|||||||:| :|:.:|
BPUM_3515___p 215 DNYNRKITFHNNRFENLNSRVPSMRFGEGHVYNNYYKGIHTTAINS---- 260
BSNT_01271___ 329 YAWGIGKSSKIYAQNNVIDVPGLSAAKTISVFSGGTALYDS---GT--LL 373
...:|:..::||.: .|.:.... :|| || ::
BPUM_3515___p 261 -----RMGAKMRIEHNVFE-------NTKNAIGS----WDSRQVGTWHVI 294
BSNT_01271___ 374 NGTQINASAANGLSSSVGWTPSLHGSIDASANVKSNVINQAGAGKLK- 420
|.:.||:|.:...||:..:.|..:.|:....||||.|::.||.||:.
BPUM_3515___p 295 NNSYINSSGSLPTSSTGTYNPPYNYSLLNVNNVKSEVLSNAGVGKVNP 342
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