Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05844 and BPUM_3471

See DNA alignment / Visit BSNT_05844 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:25
# Commandline: needle
#    -asequence pep-align/BSNT_05844___ywcD.1.24716.seq
#    -bsequence pep-align/BPUM_3471___ywcD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05844___ywcD-BPUM_3471___ywcD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05844___ywcD-BPUM_3471___ywcD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05844___ywcD
# 2: BPUM_3471___ywcD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 127
# Identity:      84/127 (66.1%)
# Similarity:   107/127 (84.3%)
# Gaps:           0/127 ( 0.0%)
# Score: 452.0
# 
#
#=======================================

BSNT_05844___      1 MYIIMGVFTTIVNIASFYILVEIMNVDYKAATVAAWILSVLFAYITNKLY     50
                     ||::|||.||||||.|||:.||:.::|||.|||.:|:.:|||||||||.|
BPUM_3471___y      1 MYLVMGVCTTIVNIVSFYLFVEMFSMDYKTATVVSWVFAVLFAYITNKKY     50

BSNT_05844___     51 VFQQKTHDLQSLLKELTAFFSVRVLSLGIDLGMMIILVGQFNTNETLAKI    100
                     ||:||..|.:||::||::|||||::|||:|||:||:.|.|...|||:|||
BPUM_3471___y     51 VFKQKARDTKSLMRELSSFFSVRLMSLGVDLGLMILFVSQMALNETVAKI    100

BSNT_05844___    101 LDNAVIVVVNYVASKWLVFKKTKEEGV    127
                     |.|.||||||||||||.|||||||:.:
BPUM_3471___y    101 LVNFVIVVVNYVASKWFVFKKTKEDAI    127


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