Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05843 and BPUM_3468
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:25
# Commandline: needle
# -asequence pep-align/BSNT_05843___galK.1.24716.seq
# -bsequence pep-align/BPUM_3468___galK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05843___galK-BPUM_3468___galK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05843___galK-BPUM_3468___galK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05843___galK
# 2: BPUM_3468___galK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 394
# Identity: 236/394 (59.9%)
# Similarity: 288/394 (73.1%)
# Gaps: 4/394 ( 1.0%)
# Score: 1212.0
#
#
#=======================================
BSNT_05843___ 1 --MREELKGIFASVFGEKEGLRFFFAPGRVNLIGEHTDYNGGHVFPCALT 48
|...|:..|...||::|.||:|||||||||||||||||||||||||||
BPUM_3468___g 1 MDMIGTLRAAFHQQFGDREELRYFFAPGRVNLIGEHTDYNGGHVFPCALT 50
BSNT_05843___ 49 MGTYAAVAERKDGLVRMYSDNFRNAGIKECSLDDIRYQKEDDWANYPKGV 98
:|||||.|:|.||.:||||.||...|:||.:|.:|.|.:.|.||||||||
BPUM_3468___g 51 LGTYAACAKRSDGRIRMYSLNFEGDGVKEFNLFEIAYVESDGWANYPKGV 100
BSNT_05843___ 99 IYEFQQRGYAVPHGFDIVFSGNIPNGAGLSSSASIELLMGVVLQNYFHPE 148
..:|.:.|..:..|||||:||||||||||||||||||:..|::..:....
BPUM_3468___g 101 FKQFIEAGMKIEEGFDIVYSGNIPNGAGLSSSASIELVTAVLINEWHSFG 150
BSNT_05843___ 149 VDALELVKMAQHAENHFIGVNCGIMDQFAIGMGKKHHAMLLNCDTLDYEY 198
|..::|..::|.|||.||||||||||||:|.:||:.||:|||||||.:||
BPUM_3468___g 151 VSNVQLALLSQRAENEFIGVNCGIMDQFSIALGKEDHAILLNCDTLAFEY 200
BSNT_05843___ 199 SKLNVSGLALVIANTNKKRTLADSSYNTRRQECNDALLDLKKGLDITALG 248
|.....||||||||||||||||||.||.||.||..||.||:|.:|||.|.
BPUM_3468___g 201 STFRQEGLALVIANTNKKRTLADSKYNERRAECQSALNDLQKKIDITHLC 250
BSNT_05843___ 249 DIKPSDFDAHSSLIQNETNRRRAKHAVYENHRAIKTAHMFKENNIDEIGQ 298
::...:|...:.||:::..|:||:|.|.||.|.|:..:..|.:.|:::|.
BPUM_3468___g 251 ELTADEFAEVAHLIEDDICRKRARHVVTENERTIRAINFLKNDKIEKLGA 300
BSNT_05843___ 299 LMKESHLSLKDDYEVTCPELDELVFAAWDHEGVIGSRMTGAGFGGCTISI 348
|||.||||||:|||||..|||.|..|||.|.|.|||||||||||||||||
BPUM_3468___g 301 LMKASHLSLKNDYEVTGLELDALAEAAWRHPGTIGSRMTGAGFGGCTISI 350
BSNT_05843___ 349 VKDEFVDDFIQKVGDRYQEKTGLRADFYVADIGEGARELKGE-- 390
||:|.:..||::.|..||||||::|.||.|.||.|||||..|
BPUM_3468___g 351 VKEEQLVSFIEETGAMYQEKTGIQASFYTAGIGGGARELTKEEV 394
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