Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05806 and BPUM_3440

See DNA alignment / Visit BSNT_05806 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:23
# Commandline: needle
#    -asequence pep-align/BSNT_05806___ywdK.1.24716.seq
#    -bsequence pep-align/BPUM_3440___ywdK.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05806___ywdK-BPUM_3440___ywdK.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05806___ywdK-BPUM_3440___ywdK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05806___ywdK
# 2: BPUM_3440___ywdK
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 123
# Identity:      89/123 (72.4%)
# Similarity:   111/123 (90.2%)
# Gaps:           0/123 ( 0.0%)
# Score: 497.0
# 
#
#=======================================

BSNT_05806___      1 MKVFIILGAINALLAVGLGAFGAHGLEGKIPDKYLQVWHTGVQYHMYHAL     50
                     ||:|.||||:||:||||||||||||||||||:||:::|:.||||.|:||:
BPUM_3440___y      1 MKLFFILGAMNAMLAVGLGAFGAHGLEGKIPEKYIEIWNKGVQYQMFHAI     50

BSNT_05806___     51 GLFVVAFLADKLSGIGSVTTAGWLMFAGIVLFSGSLYILSVTQISILGAI    100
                     |||:||||||||||:..|.||||:|.|||:.||||||:|::||:.|||||
BPUM_3440___y     51 GLFIVAFLADKLSGVSLVPTAGWVMLAGILFFSGSLYVLALTQVKILGAI    100

BSNT_05806___    101 TPLGGVAFIISWIMIVVAAVKYL    123
                     ||:||:|||.||||:|:||.|.|
BPUM_3440___y    101 TPIGGLAFIASWIMLVIAAAKNL    123


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