Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05794 and BPUM_3432
See
DNA alignment /
Visit
BSNT_05794 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:22
# Commandline: needle
# -asequence pep-align/BSNT_05794.1.24716.seq
# -bsequence pep-align/BPUM_3432___spsE.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05794-BPUM_3432___spsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05794-BPUM_3432___spsE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05794
# 2: BPUM_3432___spsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 375
# Identity: 213/375 (56.8%)
# Similarity: 255/375 (68.0%)
# Gaps: 61/375 (16.3%)
# Score: 1100.5
#
#
#=======================================
BSNT_05794 0 -------------------------------------------------- 0
BPUM_3432___s 1 MAHFYIGDRKVGDGAPVFIIAEAGINHDGKLDQALALIDVAKEAGADAVK 50
BSNT_05794 1 --------MYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCRE 42
||||:||||:||.|::|||||||:.||:|.||:..||..|.|
BPUM_3432___s 51 FQMFQADRMYQKEPGLYETAKGEEVSIFSLVEQMELPPEWLPVLLSRCAE 100
BSNT_05794 43 KQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMI 92
|.::||||||||.|||||..|.|.|||:|||||||||||::.|...:|:|
BPUM_3432___s 101 KGLLFLSTVCDEESADLLNQTDPPAFKLASYEINHLPLLRHTASFQKPII 150
BSNT_05794 93 FSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPML 142
||||||.|:|||||:..|.:|.|:|:||||||||||||..::||.|:..|
BPUM_3432___s 151 FSTAGATIADVHEAYEAITSEQNDQVAIMHCVAKYPAPRAFTNLRVLQTL 200
BSNT_05794 143 AAAFPEAVIGFSDHSEHPTEAPCAAVRLGAKLIEKHFTIDKDLPGADHSF 192
|:||||||||||||||||||||.|||:|||.:|||||||||.||||||||
BPUM_3432___s 201 ASAFPEAVIGFSDHSEHPTEAPVAAVKLGAAMIEKHFTIDKTLPGADHSF 250
BSNT_05794 193 ALNPDELKEMVDGIRKTEAELKQGIT--KPVSEKLLGSSYKTTTSIEGEI 240
||:|:||||||..||..|.:..|..| ..|||.|||||:||||:|||:|
BPUM_3432___s 251 ALDPEELKEMVQHIRTAEKKRNQSETDAHSVSEDLLGSSFKTTTAIEGQI 300
BSNT_05794 241 RNFAYRGIFTTAPIQKGEAFSEDNIAVLRPGQKPQGLHPRFFELLTSGVR 290
|.|||||||||..|.|||..:|:|:||||||||.||||||:.|:|. |.:
BPUM_3432___s 301 REFAYRGIFTTRGIAKGETLTEENLAVLRPGQKSQGLHPRYMEILL-GAK 349
BSNT_05794 291 AVRDIPADTGIVWDDILLKDSPFHE 315
|||||||.|||.|.|:|:::|...:
BPUM_3432___s 350 AVRDIPAHTGISWKDVLMQESANDQ 374
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.