Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_06031 and BPUM_3407
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:35
# Commandline: needle
# -asequence pep-align/BSNT_06031.1.24716.seq
# -bsequence pep-align/BPUM_3407.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_06031-BPUM_3407.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_06031-BPUM_3407.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06031
# 2: BPUM_3407
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 614
# Identity: 161/614 (26.2%)
# Similarity: 258/614 (42.0%)
# Gaps: 184/614 (30.0%)
# Score: 604.5
#
#
#=======================================
BSNT_06031 1 MKTLDVHALHEGIQHTIEKLDKQKQQLEKLEKSVEHLAGMKDALKGKGGD 50
|||||..||..||..|:..|.:|.||:..:||.::.:..:..||||:.|.
BPUM_3407 1 MKTLDAFALINGIDQTLNTLKQQSQQVSSIEKQIQQIISLDGALKGEAGQ 50
BSNT_06031 51 AIRTFYEECHKPFLLFFGMFIDEYKKVLKQTQHAISSVESDSHGMIAEAF 100
|||:||.|||.|||.||.:.|:||...||.|:.|:.::||:.:|.|::||
BPUM_3407 51 AIRSFYTECHIPFLQFFQVVIEEYSTALKNTKQALHALESNQNGFISQAF 100
BSNT_06031 101 LSHDARHGVKHAREVTEQLTDAVNRQTSAIGHIVSLPAVNDTFFRMETEQ 150
:.|:...|:|.|.....::...||.....|||||.||.|:::.|:...::
BPUM_3407 101 IEHELDQGLKKAERTISEIVSEVNHAIGRIGHIVHLPNVDESTFQQNYQK 150
BSNT_06031 151 AERLITDTLHKLFQFDGQQTQAL-EAKSDFQTMKKYIDQLETMYTGPKIE 199
|....:.|:..|..||.:||.|| |.||..||||:||:.|..|:|||||:
BPUM_3407 151 AWLETSRTIGLLHAFDREQTSALQETKSSLQTMKQYINTLSAMFTGPKID 200
BSNT_06031 200 ITGYKSGSILKSQEQENINQTFGAINPQMKQPDDSPMEMMLKKIEKHKQS 249
||.|:.|||.|:.::|.|:.|...:|.::..|.|:||.:||||:.:.:::
BPUM_3407 201 ITSYQKGSIFKNGKEEKISSTISGLNDKIDNPKDNPMMIMLKKLREKERT 250
BSNT_06031 250 NVDIVMKDGKQQKIER---EIHADDSNVTVLQKEAAAHPKVYGDIRVIND 296
||:.|:::....||.: .::....|:...:|....|.|. :.|:.|
BPUM_3407 251 NVETVVRETPSSKINQTNFTLNGKVYNINEYKKINFEHAKT---VDVMRD 297
BSNT_06031 297 KLYNNKRLKK-----IDTIEVIDELTR--------NTASIDYVGGKYYVY 333
.:....|:.: |::::.|.|:.. ||| :::.| :.
BPUM_3407 298 GMLYRLRISEKNKVTIESVKPISEVKTGDQPQNILNTA-VEFTG----IN 342
BSNT_06031 334 ENGQIV--REFYAGGK-----KRLEEVSYIPED---KVGG---------- 363
:..::: |:...|.| :.:..|..:|.. |||.
BPUM_3407 343 DAIRVITGRDPITGDKVANMDRLVSGVYMVPSTNIVKVGKYVFKIIKGEK 392
BSNT_06031 364 -AKSLDSFLAGTQYEFIEWVSPQGAVKKL----AVRGGKRVVTDVAK-HV 407
||.::....|.:|...:: :.::.|| .|...|..|.:||| :.
BPUM_3407 393 VAKRVEKSAKGARYGAKDF---EKSLVKLPPAERVAAVKMKVKEVAKSNG 439
BSNT_06031 408 VEKDIK------GDVKKKPSKGSV-------------NSKWWHPGYVD-- 436
:.||.| .||.|.|..|.: |:|..|.|.||
BPUM_3407 440 LIKDSKLSKINSRDVYKDPKTGDLYSVDTQHGRFEKTNNKGKHQGEVDFD 489
BSNT_06031 437 -------------NLSSSQTVIGIKNSPKGLSTLGSSTRQNALDAGKGWV 473
||...
BPUM_3407 490 FKQTKPADASGGHNLKIK-------------------------------- 507
BSNT_06031 474 GQGAEKMYDKAGNFLGYKSVDKMRAFRLQYKPKEKMWRANFTENEITVVG 523
BPUM_3407 507 -------------------------------------------------- 507
BSNT_06031 524 SKTELRNVHVDILD 537
BPUM_3407 507 -------------- 507
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