Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05684 and BPUM_3376

See DNA alignment / Visit BSNT_05684 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:17
# Commandline: needle
#    -asequence pep-align/BSNT_05684___uvsE.1.24716.seq
#    -bsequence pep-align/BPUM_3376___uvsE.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05684___uvsE-BPUM_3376___uvsE.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05684___uvsE-BPUM_3376___uvsE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05684___uvsE
# 2: BPUM_3376___uvsE
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 320
# Identity:     220/320 (68.8%)
# Similarity:   261/320 (81.6%)
# Gaps:           0/320 ( 0.0%)
# Score: 1172.0
# 
#
#=======================================

BSNT_05684___      1 MIFRFGFVSNAMSLWDASPAKTLTFARYSKLSKTERKEALLTVTKANLHN     50
                     |.:|||:||||::||:|||||:|||||||||||.|.|||||..|||||.|
BPUM_3376___u      1 MRYRFGYVSNAVTLWEASPAKSLTFARYSKLSKEEGKEALLRTTKANLVN     50

BSNT_05684___     51 TMRTLHYIIGHGIPLYRFSSSIVPLATHPDVMWDFVTPFQKEFREIGELV    100
                     |:|||::.|.|.|||||||||||||||||:|.|||||||||||.|||:||
BPUM_3376___u     51 TLRTLYFAISHDIPLYRFSSSIVPLATHPEVRWDFVTPFQKEFLEIGDLV    100

BSNT_05684___    101 KTHQLRTSFHPNQFTLFTSPKESVTKNAVTDMAYHYRMLEAMGIADRSVI    150
                     |.|.||.||||||||||||||.|:|:|||.||.|||:|||||.:.....:
BPUM_3376___u    101 KRHGLRVSFHPNQFTLFTSPKPSITENAVIDMTYHYQMLEAMKLEKEGYM    150

BSNT_05684___    151 NIHIGGAYGNKDTATAQFHQNIKQLPQEIKERMTLENDDKTYTTEETLQV    200
                     |||:|||||:||:|..:|.:||||||..||.||||||||||||:.|||.|
BPUM_3376___u    151 NIHVGGAYGDKDSALQRFDENIKQLPAHIKARMTLENDDKTYTSLETLGV    200

BSNT_05684___    201 CEQEDVPFVFDFHHFYANPDDHADLNVALPRMIKTWERIGLQPKVHLSSP    250
                     ||:..:|||||:||..||.||:|.|...||||..||...|:.||:|||||
BPUM_3376___u    201 CEKHGIPFVFDYHHHVANKDDNAALEDILPRMFDTWTSTGIPPKIHLSSP    250

BSNT_05684___    251 KSEQAIRSHADYVDANFLLPLLERFRQWGTNIDFMIEAKQKDKALLRLMD    300
                     |||:|||||||.||.:|:|||....:..|.::|||||||.||:|||||::
BPUM_3376___u    251 KSEKAIRSHADGVDMSFVLPLFHALKPCGRDVDFMIEAKLKDQALLRLVE    300

BSNT_05684___    301 ELSSIRGVKRLGGGALQWKS    320
                     |||:|||.||:|||.::||.
BPUM_3376___u    301 ELSAIRGNKRVGGGTIEWKP    320


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.