Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05654 and BPUM_3346
See
DNA alignment /
Visit
BSNT_05654 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:14
# Commandline: needle
# -asequence pep-align/BSNT_05654___racA.1.24716.seq
# -bsequence pep-align/BPUM_3346___racA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05654___racA-BPUM_3346___racA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05654___racA-BPUM_3346___racA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05654___racA
# 2: BPUM_3346___racA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 192
# Identity: 90/192 (46.9%)
# Similarity: 127/192 (66.1%)
# Gaps: 18/192 ( 9.4%)
# Score: 409.0
#
#
#=======================================
BSNT_05654___ 1 MNTNMVASELGVSAKTVQRWVKQLNLPAERNELGHYSFTAEDVKVLKSVQ 50
||||.||.|:|||:||:||||||||:|..|||||||.|..:.|::||.|:
BPUM_3346___r 1 MNTNEVAKEIGVSSKTIQRWVKQLNIPVARNELGHYEFHEDIVQLLKEVK 50
BSNT_05654___ 51 KQISEGTAIQDIHLPKSAKKRTGFLVQKTSSDTE-----RRIEQLEQKLD 95
.|:|||..:|||.||..:: .||:.|...| :|||.||::::
BPUM_3346___r 51 HQMSEGVILQDIRLPIHSE-----TVQQLSPAVETDVSTKRIEALEKQVN 95
BSNT_05654___ 96 TLLQQRQDESELMARMSELERQLKQKADEGVSYQLLQHRREIDDILADLQ 145
.|:||:...:::..|:.||||:|.:|||||||||||||||||:|:...|:
BPUM_3346___r 96 QLIQQQLHSTDVEKRLQELERKLAKKADEGVSYQLLQHRREIEDLTTKLE 145
BSNT_05654___ 146 SMTSQMKEFTAQP--IPETAAASEKTKTRKKPLLSLF-KFQT 184
.:|.::| || |.|....::....:|:.|..|| .|:
BPUM_3346___r 146 RLTERLK----QPSQIEEKKEITQPDIKKKRVLFPLFHSFR- 182
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.