Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05630 and BPUM_3332

See DNA alignment / Visit BSNT_05630 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:13
# Commandline: needle
#    -asequence pep-align/BSNT_05630___atpB.1.24716.seq
#    -bsequence pep-align/BPUM_3332___atpB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05630___atpB-BPUM_3332___atpB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05630___atpB-BPUM_3332___atpB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05630___atpB
# 2: BPUM_3332___atpB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 244
# Identity:     183/244 (75.0%)
# Similarity:   210/244 (86.1%)
# Gaps:          21/244 ( 8.6%)
# Score: 986.0
# 
#
#=======================================

BSNT_05630___      1 ---------------------MITVASVIVLLIAILTTRTLSIRPGKAQN     29
                                          |||:||:||||||:||||.|||||.||||
BPUM_3332___a      1 MGHSSKTTEFLGLTFNLSNVLMITIASIIVLLIAVLTTRVLSIRPTKAQN     50

BSNT_05630___     30 FMEWIVDFVRNIIGSTMDLKTGANFLALGVTLLMYIFVSNMLGLPFSITI     79
                     |||||||||||||||:||:||||.||||||||||||||||||||||||::
BPUM_3332___a     51 FMEWIVDFVRNIIGSSMDMKTGAPFLALGVTLLMYIFVSNMLGLPFSISV    100

BSNT_05630___     80 GHELWWKSPTADPAITLTLAVMVVALTHYYGVKMKGLKEYSKDYLRPVPF    129
                     .|.|||||||||||||:||||||:.||||||||.||:|||:|||.||:|.
BPUM_3332___a    101 DHNLWWKSPTADPAITMTLAVMVMGLTHYYGVKAKGVKEYTKDYFRPIPL    150

BSNT_05630___    130 MLPMKIIEEFANTLTLGLRLYGNIFAGEILLGLLAGLATSHYSQSVALGL    179
                     ::|:|||||||||||||||||||||||||||||||||||:.|||::|||:
BPUM_3332___a    151 LVPLKIIEEFANTLTLGLRLYGNIFAGEILLGLLAGLATNFYSQNIALGI    200

BSNT_05630___    180 VGTIGAILPMLAWQAFSLFIGAIQAFIFTMLTMVYMSHKISHDH    223
                     :||:|||:||:.|||||||:|.|||||||||||||:|||:|.:|
BPUM_3332___a    201 IGTLGAIVPMIVWQAFSLFVGTIQAFIFTMLTMVYISHKVSDEH    244


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