Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05617 and BPUM_3322

See DNA alignment / Visit BSNT_05617 in genome browser / Return to Orthologue table

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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05617___ywmB.1.24716.seq
#    -bsequence pep-align/BPUM_3322___ywmB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05617___ywmB-BPUM_3322___ywmB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05617___ywmB-BPUM_3322___ywmB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05617___ywmB
# 2: BPUM_3322___ywmB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity:     124/248 (50.0%)
# Similarity:   171/248 (69.0%)
# Gaps:           4/248 ( 1.6%)
# Score: 655.0
# 
#
#=======================================

BSNT_05617___      1 MNMKKKQVSHAIIISVMLSFVIAVFHTIHASELTPLAQMAEGMERQDVSI     50
                        .:|.:....:.:.:|.||:.: ..:.|.|.:||||:|||:..|.:.:
BPUM_3322___y      1 ---MRKYIKGWPLFAFILFFVLMI-QGVRAEESSPLAQIAEGLNNQQIEV     46

BSNT_05617___     51 DKWTLHAKQNMSLTEKEFYQKVQRLKSEYRQYDWVIAREDKMIKAIGTYT    100
                     |.||||||.|::::.::|.:||:|.|.|.|||:|....|:.:.|..|.|.
BPUM_3322___y     47 DGWTLHAKTNVNMSSEQFSKKVKRFKDELRQYEWTEKEEEHVTKVTGIYK     96

BSNT_05617___    101 DKKNRTSFRLQLVTTLKKHNPTSYLLYEQMSLETPDSWNDTYEQFERETL    150
                     |:||.|..::.||.|..|.|..|||||||......::|..||:||.|...
BPUM_3322___y     97 DEKNDTISKILLVKTDTKSNQKSYLLYEQKGARPLNTWEHTYDQFVRHAK    146

BSNT_05617___    151 GIFQEKVVIFTCLNGHLDDNMNIVLQKKANQLLNEFQARSVEHVVEPNFV    200
                     .|.|||.||||||:||::..|::||||||..|.|||||:.||::||.|||
BPUM_3322___y    147 SILQEKFVIFTCLDGHVNGMMDVVLQKKAEMLANEFQAKPVEYLVESNFV    196

BSNT_05617___    201 SISAFTDEWEEYIMTSKHKMNLQIALRSAEMGGKHTVTVGTPIVTTEY    248
                     |:||:||:||::||||..|||:|||:||:||...||:|||||||||||
BPUM_3322___y    197 SLSAYTDKWEQFIMTSNDKMNVQIAIRSSEMNENHTITVGTPIVTTEY    244


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