Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_01508 and BPUM_3312

See DNA alignment / Visit BSNT_01508 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:03
# Commandline: needle
#    -asequence pep-align/BSNT_01508___rpsN.1.24716.seq
#    -bsequence pep-align/BPUM_3312___rpsN2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_01508___rpsN-BPUM_3312___rpsN2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01508___rpsN-BPUM_3312___rpsN2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01508___rpsN
# 2: BPUM_3312___rpsN2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 89
# Identity:      70/89 (78.7%)
# Similarity:    81/89 (91.0%)
# Gaps:           0/89 ( 0.0%)
# Score: 371.0
# 
#
#=======================================

BSNT_01508___      1 MAKKSKVAKELKRQQLVEQYAGIRRELKEKGDYEALSKLPRDSAPGRLHN     50
                     ||||||:|||.||||||.:||.:|:||||:||||||.||||||:|.||.|
BPUM_3312___r      1 MAKKSKIAKEKKRQQLVLKYAELRKELKEQGDYEALRKLPRDSSPTRLKN     50

BSNT_01508___     51 RCMVTGRPRGYMRKFKMSRIAFRELAHKGQVPGVKKASW     89
                     ||.:|||||||:||||||||||||||:||.:|||||:||
BPUM_3312___r     51 RCELTGRPRGYLRKFKMSRIAFRELAYKGHIPGVKKSSW     89


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