Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05553 and BPUM_3285

See DNA alignment / Visit BSNT_05553 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:10
# Commandline: needle
#    -asequence pep-align/BSNT_05553.1.24716.seq
#    -bsequence pep-align/BPUM_3285___mscL.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05553-BPUM_3285___mscL.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05553-BPUM_3285___mscL.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05553
# 2: BPUM_3285___mscL
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 157
# Identity:      85/157 (54.1%)
# Similarity:   104/157 (66.2%)
# Gaps:          28/157 (17.8%)
# Score: 424.5
# 
#
#=======================================

BSNT_05553         1 MKKGKWPAAHLSFFLYKYRKAGDCMWNEFKAFAMRGNIVDLAIGVVIGGA     50
                                             |..||:.||::||::|||:||:||||
BPUM_3285___m      1 ------------------------MLKEFREFAVKGNVIDLAVGVIIGGA     26

BSNT_05553        51 FGKIVTSLVNDIIMPLVGLLLGGLDFSGLSFTFGDAVVKYGSFIQTIVNF    100
                     |||||||||||:||||||:::||.||||||...|.|.:.|||||||:::|
BPUM_3285___m     27 FGKIVTSLVNDLIMPLVGIIIGGHDFSGLSIKIGSAQILYGSFIQTVIDF     76

BSNT_05553       101 LIISFSIFIVIRTLNGLRRKKEAAEEEAAEEAMDAQEELLKEIRDLLKQQ    150
                     |||||||||.||.||.|:|||  .|||...|..|..|.||.|||||||.|
BPUM_3285___m     77 LIISFSIFIFIRYLNKLKRKK--VEEEEVVETPDQTEVLLTEIRDLLKHQ    124

BSNT_05553       151 AKSSE--    155
                     ::|.:  
BPUM_3285___m    125 SQSKDVQ    131


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