Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05480 and BPUM_3267
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:07
# Commandline: needle
# -asequence pep-align/BSNT_05480___rbsC.1.24716.seq
# -bsequence pep-align/BPUM_3267___rbsC.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05480___rbsC-BPUM_3267___rbsC.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05480___rbsC-BPUM_3267___rbsC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05480___rbsC
# 2: BPUM_3267___rbsC
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 322
# Identity: 275/322 (85.4%)
# Similarity: 296/322 (91.9%)
# Gaps: 5/322 ( 1.6%)
# Score: 1373.0
#
#
#=======================================
BSNT_05480___ 1 MKTEQLQTEQKRIHFDGVMQKLGPFLGLFILVIIVSILNPSFLEPLNILN 50
::.......||.:||||||||||.|||.|||||||:|||||||||
BPUM_3267___r 1 -----MKPLTSNGRFDNIMQKLGPFLGLIILVAIVSILNPAFLEPLNILN 45
BSNT_05480___ 51 LLRQVAINGLIAFGMTFVILTGGIDLSVGAILALSSALVAGMIVSGVDPV 100
||||::||.|||||||||||||||||||||||||||||.||.||||:||:
BPUM_3267___r 46 LLRQISINALIAFGMTFVILTGGIDLSVGAILALSSALTAGFIVSGMDPI 95
BSNT_05480___ 101 LAIILGCIIGAVLGMINGLLITKGKMAPFIATLATMTVFRGLTLVYTDGN 150
||||:|.||||:|||:|||||||||||||||||||||:||||||||||||
BPUM_3267___r 96 LAIIVGSIIGAILGMVNGLLITKGKMAPFIATLATMTIFRGLTLVYTDGN 145
BSNT_05480___ 151 PITGLGTNYAFQMFGCGYFLGIPVPAITMVLAFVILWVLLHKTPFGRRTY 200
||||||:|||||:||.|||||||||||||:|.|::|||||||||||||||
BPUM_3267___r 146 PITGLGSNYAFQLFGRGYFLGIPVPAITMLLTFIVLWVLLHKTPFGRRTY 195
BSNT_05480___ 201 AIGGNEKAALISGIKVTRVKVMIYSLAGLLSALAGAILTSRLHSAQPTAG 250
||||||||||||||||.|||:|||||||.:||||||||||||:|||||||
BPUM_3267___r 196 AIGGNEKAALISGIKVPRVKIMIYSLAGFMSALAGAILTSRLNSAQPTAG 245
BSNT_05480___ 251 ESYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGTLNNGLNLLGVSSF 300
.|||||||||||||||||||||||||||||||||||.||||:||||||||
BPUM_3267___r 246 TSYELDAIAAVVLGGTSLSGGRGRIVGTLIGVLIIGVLNNGMNLLGVSSF 295
BSNT_05480___ 301 YQLVVKGIVILIAVLLDRKKSA 322
||.|||||||||||||||||||
BPUM_3267___r 296 YQSVVKGIVILIAVLLDRKKSA 317
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