Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05470 and BPUM_3257
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:06
# Commandline: needle
# -asequence pep-align/BSNT_05470___ywtB.1.24716.seq
# -bsequence pep-align/BPUM_3257___ywtB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05470___ywtB-BPUM_3257___ywtB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05470___ywtB-BPUM_3257___ywtB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05470___ywtB
# 2: BPUM_3257___ywtB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 389
# Identity: 231/389 (59.4%)
# Similarity: 290/389 (74.6%)
# Gaps: 10/389 ( 2.6%)
# Score: 1225.0
#
#
#=======================================
BSNT_05470___ 1 MKKELSFHEKLLKLTKQQKKKTNKHVFIAIPIVFVLMFAFMWAGKAETPK 50
|.|:|||.|||||:||.|||||||||.||:|||....|.|.:.|:|:.|.
BPUM_3257___y 1 MNKKLSFQEKLLKITKNQKKKTNKHVLIALPIVIACTFLFTFIGQAKVPT 50
BSNT_05470___ 51 VKTYSDDVLSASFVGDIMMGRYVEKVTEQKGADSIFQYVEPIFRASDYVA 100
|:...:::|:||||||||.||.|||||::.|...:|:|.:|.|..||||.
BPUM_3257___y 51 VQKNPENILTASFVGDIMFGRNVEKVTDRYGKQHLFRYAKPYFDVSDYVT 100
BSNT_05470___ 101 GNFENPVTYQKNYKQADKEIHLQTNKESVKVLKDMNFTVLNSANNHAMDY 150
||||:||...:. :.|.|.|||:|:::|||.|||:.|:.||.|||||.||
BPUM_3257___y 101 GNFEHPVASDQE-QAAQKNIHLKTDEDSVKALKDLKFSALNFANNHAADY 149
BSNT_05470___ 151 GVQGMKDTLGEFAKQNLDIVGAGYSLSDAKKKISYQKVNGVTIATLGFTD 200
|.:|:..|:..|.:.::|..|||.:|.|||:.|||::||||.||||||||
BPUM_3257___y 150 GEKGLNKTIDAFEQADMDYTGAGRNLQDAKQNISYKEVNGVKIATLGFTD 199
BSNT_05470___ 201 VSGKGFAAKKNTPGVLPADPEIFIPMISEAKKHADIVVVQSHWGQEYDND 250
|.||.|.|.....|:|||||.|||||||:|.:.||:|||.:||||||:|:
BPUM_3257___y 200 VYGKNFKATNRKAGILPADPSIFIPMISQAAEKADVVVVHAHWGQEYNNE 249
BSNT_05470___ 251 PNDRQRQLARAMSDAGADIIVGHHPHVLEPIEVYNGTVIFYSLGNFVFDQ 300
.|||||:||||||.||||||:|.|||||||:||||||.||||||||:|||
BPUM_3257___y 250 VNDRQRELARAMSKAGADIIIGAHPHVLEPMEVYNGTAIFYSLGNFIFDQ 299
BSNT_05470___ 301 GWTRTRDSALVQYHLKKNGTGRFEVTPIDIHEATPAPVKKDSLKQKTIIR 350
||:||||||||||||.::|...|||.|:.|.||||||||..|.:.|:|||
BPUM_3257___y 300 GWSRTRDSALVQYHLNEDGKATFEVVPMYIKEATPAPVKAGSFESKSIIR 349
BSNT_05470___ 351 ELTKDSNFAWKVEDGKLTFDIDHSDKLKSK--------- 380
.||..:|..||.:||.:.|::||:||:|..
BPUM_3257___y 350 MLTNGTNADWKEKDGHIFFEVDHADKVKHLKENGGKEKK 388
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