Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05393 and BPUM_3197

See DNA alignment / Visit BSNT_05393 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05393___yviA.1.24716.seq
#    -bsequence pep-align/BPUM_3197___degV.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05393___yviA-BPUM_3197___degV.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05393___yviA-BPUM_3197___degV.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05393___yviA
# 2: BPUM_3197___degV
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 281
# Identity:     200/281 (71.2%)
# Similarity:   242/281 (86.1%)
# Gaps:           1/281 ( 0.4%)
# Score: 1080.0
# 
#
#=======================================

BSNT_05393___      1 MNIAVVTDSTAYIPKEIREQHQIHMIPLQVVFREETYREEIELDWKSFYE     50
                     |.||||||||||||:|:|::|.||||||.|:|..|:||||||:|||.:||
BPUM_3197___d      1 MKIAVVTDSTAYIPQELRDKHHIHMIPLNVIFGNESYREEIEMDWKIYYE     50

BSNT_05393___     51 EVKKHNELPTTSQPPIGELVALYEELGKSYDAVISIHLSSGISGTFSSAA    100
                     |||||.||||||||..|||:.|||:|.::||||||||||||||||::|||
BPUM_3197___d     51 EVKKHKELPTTSQPAFGELIELYEKLSETYDAVISIHLSSGISGTYNSAA    100

BSNT_05393___    101 AADSMVDNIDVYPFDSEISCLAQGFYALKAAELIKNGASSPEDIIKELEE    150
                     :|:.:||.||:||||:|.||:|||||.::|||.|:.|| ||::::..|..
BPUM_3197___d    101 SANDLVDGIDIYPFDTETSCMAQGFYVIEAAEKIQAGA-SPQEVLAHLNY    149

BSNT_05393___    151 MKKTVRAYFMVDDLAHLQRGGRLSSAQAFIGSLLKVKPILHFDNKVIVPF    200
                     :|:..:||||||||.||||||||:.||||||||||||||||||||:||||
BPUM_3197___d    150 LKENQKAYFMVDDLTHLQRGGRLNGAQAFIGSLLKVKPILHFDNKLIVPF    199

BSNT_05393___    201 EKIRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAKIIEELSAK    250
                     ||||||||||||::||.|||||:|:||||.:||.|||||..::|..||.|
BPUM_3197___d    200 EKIRTRKKAISRMFELFDEDASRGVPMRATLIHGNREEEVDELIAHLSEK    249

BSNT_05393___    251 YPHVEFYNSYFGAVIGTHLGEGALGICWCFK    281
                     |||||||.||||||||||||||:|.:.|..:
BPUM_3197___d    250 YPHVEFYKSYFGAVIGTHLGEGSLALGWVIR    280


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