Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05390 and BPUM_3195

See DNA alignment / Visit BSNT_05390 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:01
# Commandline: needle
#    -asequence pep-align/BSNT_05390___comFB.1.24716.seq
#    -bsequence pep-align/BPUM_3195___comFB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05390___comFB-BPUM_3195___comFB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05390___comFB-BPUM_3195___comFB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05390___comFB
# 2: BPUM_3195___comFB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 102
# Identity:      53/102 (52.0%)
# Similarity:    74/102 (72.5%)
# Gaps:           9/102 ( 8.8%)
# Score: 266.5
# 
#
#=======================================

BSNT_05390___      1 MLVNSKEIVMKELLDRYMDQLHMACTCQVCQNDVLALSLNKVSPSYVTDF     50
                     ||:|:||.::||:|.:|::||:|.|.|:.|..||||:|||:|.|.|:||.
BPUM_3195___c      1 MLLNAKETLLKEILYQYLNQLNMICHCEKCIEDVLAISLNQVKPQYITDI     50

BSNT_05390___     51 KKIAYTKAELVDKQKNTAMLVILAESAAVVSESPSDLCQTKQEEAFIN--     98
                     .||:|:|:|:|||||||||||||.|:|:.||..|.  |:.:..   ||  
BPUM_3195___c     51 NKISYSKSEMVDKQKNTAMLVILTEAASKVSAFPR--CENRLP---INKD     95

BSNT_05390___     98 --     98
                       
BPUM_3195___c     96 NN     97


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