Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05366 and BPUM_3172

See DNA alignment / Visit BSNT_05366 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:59
# Commandline: needle
#    -asequence pep-align/BSNT_05366___cccB.1.24716.seq
#    -bsequence pep-align/BPUM_3172___cccB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05366___cccB-BPUM_3172___cccB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05366___cccB-BPUM_3172___cccB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05366___cccB
# 2: BPUM_3172___cccB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 112
# Identity:      57/112 (50.9%)
# Similarity:    81/112 (72.3%)
# Gaps:           3/112 ( 2.7%)
# Score: 306.5
# 
#
#=======================================

BSNT_05366___      1 MKSKLSILMIGFALSVLLAACGSNDAKEEKTDTGSKTEATASEGEELYQQ     50
                     || |..:.|:..|:.::|||||.|.:..:|  .|||:.:..|.|||:|||
BPUM_3172___c      1 MK-KSGLTMLFAAMLLVLAACGGNSSSSDK--EGSKSASNVSSGEEIYQQ     47

BSNT_05366___     51 SCVGCHGKDLEGVSGPNLQEVGGKYDEHKIESIIKNGRGNMPKGLVEDNE    100
                     :|:|||||||.|..||:|:|||.||:|.:|..|..||:|:||.|:|::.:
BPUM_3172___c     48 NCIGCHGKDLSGGGGPSLKEVGKKYNESQIADIAHNGKGSMPSGMVDEKQ     97

BSNT_05366___    101 AAVIAKWLSEKK    112
                     |..:||||:|||
BPUM_3172___c     98 AKEVAKWLAEKK    109


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