Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01306 and BPUM_3161
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence pep-align/BSNT_01306___yfkO.1.24716.seq
# -bsequence pep-align/BPUM_3161.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01306___yfkO-BPUM_3161.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01306___yfkO-BPUM_3161.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01306___yfkO
# 2: BPUM_3161
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 226
# Identity: 154/226 (68.1%)
# Similarity: 185/226 (81.9%)
# Gaps: 7/226 ( 3.1%)
# Score: 814.5
#
#
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BSNT_01306___ 1 MAD---LKKQILDAYNFRHATKEFDPNKKVSDSDFEFILETGRLSPSSLG 47
|.| |||:|::||.||||||||||.||:.:.||.||||||||||||:|
BPUM_3161 1 MRDKEQLKKEIIEAYEFRHATKEFDPTKKIPEDDFAFILETGRLSPSSVG 50
BSNT_01306___ 48 LEPWKFVVVQNPEFREKLREYTWGAQKQLPTASHFVLILARTAKDIKYNA 97
.|||||:||||..|||||:|||||||||||||||||:||||| |.:|::
BPUM_3161 51 FEPWKFLVVQNESFREKLKEYTWGAQKQLPTASHFVIILART--DARYDS 98
BSNT_01306___ 98 DYIKRHLKEVKQMPQDVYEGYLSKTEEFQKNDLHLLESDRTLFDWASKQT 147
.|.:...||:|.|..:.:|....:.::||:|||||:|:||||||||||||
BPUM_3161 99 PYAEYINKEIKGMTDETFEMVKGRYKQFQENDLHLMETDRTLFDWASKQT 148
BSNT_01306___ 148 YIALGNMMTAAAQIGVDSCPIEGFQYDHIHRILEEEGLLENGSFDISVMV 197
|||||||||||||||:||||||||.||.|||:||||||||:|.:|||||.
BPUM_3161 149 YIALGNMMTAAAQIGIDSCPIEGFSYDEIHRMLEEEGLLEDGQYDISVMA 198
BSNT_01306___ 198 AFGYRVRDP-RPKTRSAVEDVVKWV- 221
||||||.:| |.|||..:::|..|:
BPUM_3161 199 AFGYRVIEPKRGKTRRPMDEVAVWIR 224
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