Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02178 and BPUM_3158

See DNA alignment / Visit BSNT_02178 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:38
# Commandline: needle
#    -asequence pep-align/BSNT_02178___ykcC.1.24716.seq
#    -bsequence pep-align/BPUM_3158.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02178___ykcC-BPUM_3158.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02178___ykcC-BPUM_3158.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02178___ykcC
# 2: BPUM_3158
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     252/333 (75.7%)
# Similarity:   290/333 (87.1%)
# Gaps:          13/333 ( 3.9%)
# Score: 1315.5
# 
#
#=======================================

BSNT_02178___      1 MSRHIQYSIVVPVYNEELVIHETYQRLKEVMDQTKENYELLFVNDGSKDR     50
                     |.::||||||||||||||||||:|||||.|||.|.|.||||||||||.||
BPUM_3158          1 MEKNIQYSIVVPVYNEELVIHESYQRLKTVMDSTGEAYELLFVNDGSMDR     50

BSNT_02178___     51 SIEILREHSLIDPRVKIIDFSRNFGHQIAITAGMDYAQGNAIVVIDADLQ    100
                     :.|:::.:...|..|::||||||||||||||||||||:|.|:||||||||
BPUM_3158         51 TAELIKGYCQTDSNVRLIDFSRNFGHQIAITAGMDYAKGEAVVVIDADLQ    100

BSNT_02178___    101 DPPELILDMIEKWKEGYEVVYAVRTKRKGETFFKKQTAAMFYRLLSGMTD    150
                     ||||||||||||||||||||||||:||||||.|||.||::|||:|..:|:
BPUM_3158        101 DPPELILDMIEKWKEGYEVVYAVRSKRKGETVFKKYTASLFYRVLRQITE    150

BSNT_02178___    151 IDIPIDTGDFRLMDRKVCDEMKRLKEKNPFVRGLVSWVGFKQTAVEYVRD    200
                     :|||||||||||||||||.||::::|||||||||||||||||.|||||||
BPUM_3158        151 VDIPIDTGDFRLMDRKVCHEMRKIREKNPFVRGLVSWVGFKQVAVEYVRD    200

BSNT_02178___    201 ERLAGETKYPLKKMLKLSMDGITTFSHKPLKLASYAGILMSGAGFLYMFI    250
                     |||||||||||||||||||||||:||:|||||||..||.:|..||:.||:
BPUM_3158        201 ERLAGETKYPLKKMLKLSMDGITSFSYKPLKLASVTGIALSAIGFISMFL    250

BSNT_02178___    251 VLYLKLFTDSTITGWSSLIVIQLLFSGIVLLILGVIGEYIGRIYDEAKDR    300
                     ||||||||:||||||||||||||.||||:|.:||:|||||||||||||||
BPUM_3158        251 VLYLKLFTNSTITGWSSLIVIQLFFSGIILFMLGMIGEYIGRIYDEAKDR    300

BSNT_02178___    301 PLYIVQKSYGIESK----------RLYRDQHMS    323
                     |||||:.|||:::|          :.|: ||  
BPUM_3158        301 PLYIVRDSYGLQAKPHPVQSPVHFKQYK-QH--    330


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