Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_05590 and BPUM_3132

See DNA alignment / Visit BSNT_05590 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:12
# Commandline: needle
#    -asequence pep-align/BSNT_05590___ywnA.1.24716.seq
#    -bsequence pep-align/BPUM_3132.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05590___ywnA-BPUM_3132.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05590___ywnA-BPUM_3132.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05590___ywnA
# 2: BPUM_3132
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 142
# Identity:      61/142 (43.0%)
# Similarity:    91/142 (64.1%)
# Gaps:           9/142 ( 6.3%)
# Score: 283.0
# 
#
#=======================================

BSNT_05590___      1 -MINSRLAVAIHILSLISMDEKT--SSEIIADSVNTNPVVVRRMISLLKK     47
                      .|:||..||:|||:|:|:::.:  :||.||.||||||||:||::|.|||
BPUM_3132          1 MKISSRFTVAVHILALLSLEKGSLQTSEDIAGSVNTNPVVIRRIMSKLKK     50

BSNT_05590___     48 ADILTSRAGVPGASLKKDPADISLLEVYRAVQ--KQEELFAVHENPNPKC     95
                     |.::::..|..|:.|.:...:|:||:||:||:  .:.|||.:||:|||.|
BPUM_3132         51 AGLISTSLGKGGSQLNRSEDEITLLDVYKAVEVVDEGELFQIHESPNPDC    100

BSNT_05590___     96 PVGKKIQNALDETFESVQRAMENELASKSLKDVMNHLF----    133
                     |:|..||..|:......|.|||..||...|.::...|.    
BPUM_3132        101 PIGANIQAVLELILCRAQSAMEQVLAEIKLSELTQVLIKKIG    142


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.