Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05280 and BPUM_3105
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:52
# Commandline: needle
# -asequence pep-align/BSNT_05280___yvdB.1.24716.seq
# -bsequence pep-align/BPUM_3105.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05280___yvdB-BPUM_3105.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05280___yvdB-BPUM_3105.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05280___yvdB
# 2: BPUM_3105
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 540
# Identity: 396/540 (73.3%)
# Similarity: 460/540 (85.2%)
# Gaps: 10/540 ( 1.9%)
# Score: 2023.5
#
#
#=======================================
BSNT_05280___ 1 MRFSGRFKGYNLQKFQKDLIAGIVVGVVAIPLGMAFAIASGVEPEYGLYT 50
|||.|||:||:..|.::|||||:|||||||||||||||||||.|||||||
BPUM_3105 1 MRFYGRFEGYDTSKLRRDLIAGLVVGVVAIPLGMAFAIASGVGPEYGLYT 50
BSNT_05280___ 51 VVIAGICISLFGGSKYQIGGPTGAFVPILFGIVMQYGLENLLIAGFMAGV 100
|::|||.||||||||||||||||||||||||||.|||:|||||||||||.
BPUM_3105 51 VIVAGILISLFGGSKYQIGGPTGAFVPILFGIVSQYGIENLLIAGFMAGC 100
BSNT_05280___ 101 MLVLFGLFKLGKIMKFVPKPVIVGFTAGIAVLIFTEQIANFLGLRNVEKH 150
:|||||:|||||:|||:|:|||:||||||||:||:.||||||||:.||||
BPUM_3105 101 ILVLFGIFKLGKLMKFIPRPVIIGFTAGIAVIIFSGQIANFLGLKGVEKH 150
BSNT_05280___ 151 ENFHHNMFEIVQQLGTFNVYAILTAVIGLVILLVSAKVMPKVPGALLALL 200
|:|..||.|||..|||.|..|||||||||:::|.:.|.:||:|||||.||
BPUM_3105 151 ESFFLNMREIVVHLGTVNSLAILTAVIGLIVILAAQKYIPKIPGALLGLL 200
BSNT_05280___ 201 ISTVVAVVFFPDRMATIGSTYGEIPRHLPEFQFPELTLDKMVMLFPAALV 250
.||.:||:||..::.||||.||||||.||.|.|||||::||:.|.|.|:|
BPUM_3105 201 ASTFLAVLFFQGQVETIGSAYGEIPRQLPSFAFPELTIEKMIYLLPPAIV 250
BSNT_05280___ 251 IALLGGLESILSAMVADNMKGSKHDSNKELVGQGIANMAAPLFGGIPATG 300
||||||:|||||||||||||||||||||||||||||||||||||||||||
BPUM_3105 251 IALLGGVESILSAMVADNMKGSKHDSNKELVGQGIANMAAPLFGGIPATG 300
BSNT_05280___ 301 AIARTATNIKNGAVSPVSGVVHGVVVLLVLLVFAPYASHVPLASMAPILM 350
||||||||||||..||:|||||||||||:|::||||||.:|||:||||||
BPUM_3105 301 AIARTATNIKNGGASPISGVVHGVVVLLILMLFAPYASMIPLAAMAPILM 350
BSNT_05280___ 351 VVAWNMSERKEVANMLRLKNADSFILAATFALTVLFDLIIGVATGLLLAF 400
.|||||||:||..|::::|||||.:|..||.|||:.||||||..||:|||
BPUM_3105 351 FVAWNMSEKKEFINIVKVKNADSLVLVVTFLLTVIGDLIIGVTAGLILAF 400
BSNT_05280___ 401 VFFIRRMSEATRIH------NQETHPVLAKRED-PSVSMYAIEGPLFFGS 443
:.||::||:.|.|. ..||...|.|:.| ..:||||||||||||:
BPUM_3105 401 IAFIKKMSQITSIRPNVVVPQMETAAALEKQTDQQGISMYAIEGPLFFGT 450
BSNT_05280___ 444 IDSLESSLLEHVQKKPKTLILLMNKVHYMDTSAEAVLGNIMNRIKRHNGK 493
.||||:|:|:|||.||||||||||||:||||||||||.||.||:|.||||
BPUM_3105 451 TDSLENSILDHVQTKPKTLILLMNKVNYMDTSAEAVLMNISNRLKHHNGK 500
BSNT_05280___ 494 LMIVGLQSQPKELLHKTGLFHKIGKQHFFDHHDEITG--- 530
||||||||||||||.:|||||.||||:||:..|:|:.
BPUM_3105 501 LMIVGLQSQPKELLRRTGLFHHIGKQYFFERTDDISPQHL 540
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