Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_00986 and BPUM_3097
See
DNA alignment /
Visit
BSNT_00986 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:39
# Commandline: needle
# -asequence pep-align/BSNT_00986___ydhE.1.24716.seq
# -bsequence pep-align/BPUM_3097.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_00986___ydhE-BPUM_3097.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_00986___ydhE-BPUM_3097.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00986___ydhE
# 2: BPUM_3097
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 397
# Identity: 208/397 (52.4%)
# Similarity: 284/397 (71.5%)
# Gaps: 10/397 ( 2.5%)
# Score: 1086.0
#
#
#=======================================
BSNT_00986___ 1 MKTVLILNFPAEGHVNPTLGITKAFSDKGYDVHYISTEKYKKRLEAAGAT 50
|..||::.|||||||||.|||.||::|:|.:||.::|..|::|::..||.
BPUM_3097 1 MAKVLLITFPAEGHVNPMLGIIKAWTDRGDEVHAVTTVHYEERMKRLGAH 50
BSNT_00986___ 51 VHLHRDLLRTTPIHVGSPNGILDFVKIHIKTSLDILQIVKDLSKSIQFDF 100
||.|.|.:||..:..|:.:.:..|....::||.|||.:|:.||:...|||
BPUM_3097 51 VHKHPDYIRTLHVDEGNLDSMQPFFHAMLQTSFDILGVVETLSQQHSFDF 100
BSNT_00986___ 101 VYYDKFGAGELVRDYLDIPGVSSSASFLFGEEHLKILPLHPESGAPLELD 150
||:|.|||||||||||.|||:.|:.||:..|.|.. .||:.: |
BPUM_3097 101 VYFDMFGAGELVRDYLQIPGIGSNPSFVLQEAHFD-TPLYRK-------D 142
BSNT_00986___ 151 QECEDLLAKMKETYGVAPKNLVQFMNNKGELNVVYTSRYFQPESDRFGDE 200
::.:.||..::|.:||.|..|:|||.|:||||:||||.||||..|...|.
BPUM_3097 143 EKADHLLESIQERFGVQPTRLMQFMKNRGELNIVYTSEYFQPSVDAVNDS 192
BSNT_00986___ 201 CLFIGPSFPKRAEKTDFPIEQLKDESVIYISMGTVLDHTEDFFNLCIDAF 250
.:||||||.|||::.|||:|.|:.|.|::|||||||.:||.|||:|||||
BPUM_3097 193 FVFIGPSFLKRADQHDFPLEALEREKVVFISMGTVLGNTEAFFNMCIDAF 242
BSNT_00986___ 251 SGFNGKVVIAAGEKADLTKLKQAPENFIIAPYVPQLEVLEQSDVFITHGG 300
:.|:||||:|.|||.|.:.||:||.:|:|.||||||||||.:|||:||||
BPUM_3097 243 ADFDGKVVLATGEKVDQSLLKEAPSHFLIEPYVPQLEVLELTDVFVTHGG 292
BSNT_00986___ 301 MNSVNEGIHFSVPLVVMPHDKDQPMVAQRLSELHAGYVISKDEVNAQILK 350
|||||||||:.||:||:|.|||||||||||:||.|...:.||::.|:.|:
BPUM_3097 293 MNSVNEGIHYHVPMVVIPVDKDQPMVAQRLTELSAARALDKDQLTAKQLR 342
BSNT_00986___ 351 QAVDEVLRNDQYMAGIKKINQSFKECMDMEEVMERIDELIRQKNK-- 395
:.|:.||.:|.|.|||:||.:||:.....::.:..||:.::.|..
BPUM_3097 343 ETVESVLGSDTYRAGIEKIEESFQTAGGTDKALRTIDQWMQTKQTQL 389
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.