Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_02054 and BPUM_3090
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:31
# Commandline: needle
# -asequence pep-align/BSNT_02054___yjeA.1.24716.seq
# -bsequence pep-align/BPUM_3090.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_02054___yjeA-BPUM_3090.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02054___yjeA-BPUM_3090.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02054___yjeA
# 2: BPUM_3090
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 474
# Identity: 254/474 (53.6%)
# Similarity: 336/474 (70.9%)
# Gaps: 12/474 ( 2.5%)
# Score: 1324.0
#
#
#=======================================
BSNT_02054___ 1 MLAKRIKWFHVLIAVVCVVGLIGFFHNHSLKKETVMNKVRTDSQYGNVEI 50
::.:.||...|.|:..|:|::.||.|.. ...|....|:.|:.|.||||
BPUM_3090 1 -MSLKGKWSIGLFALAIVIGVVAFFQNQQ-ASGTEKKNVKQDTNYKNVEI 48
BSNT_02054___ 51 ATLVHDGKTFNYAVNYPVFKNEKMDSALKRFAEKEVRQFQK---ETKDVD 97
.|||:|||...||||||:|..:|:|..::.:|...:..|:| |.||||
BPUM_3090 49 VTLVNDGKFMRYAVNYPLFHQKKLDDKIQSYANSALEHFKKTFSEAKDVD 98
BSNT_02054___ 98 QEHTTKRNELNVDYKIVHYAKQTVAIVFNEYKYIGGAHGQTVKKTFNYDF 147
: .||.|||:||.:||||||:.||.|..|.|.|..:|.|...|.||||
BPUM_3090 99 E---NKRFELNIDYDMVHYAKQSAAIRFTTYTYTGQQNGTTNHLTINYDF 145
BSNT_02054___ 148 SKQAFLSIDDIFKEDADYIHKLSLIAYHELKKNKDIAADDALLKEGTAPK 197
.|:.||...|:|....:::.|||.|.|.||:|:|.::.|.|||::||||.
BPUM_3090 146 QKKTFLDTKDLFLPKTNFLKKLSYITYSELQKDKTLSKDQALLQKGTAPT 195
BSNT_02054___ 198 VENFSRFAIKEDYIELYFDTYQVAAGYLGEQSIAIKKSLLKDILKEQYID 247
.:|||:||:||.|:|.||...|||...||.|::||||:|||||:|.:|::
BPUM_3090 196 AQNFSQFALKEKYVEFYFPASQVADEDLGPQTLAIKKTLLKDIMKPEYMN 245
BSNT_02054___ 248 KAKNKNKIKEQKPKHEVISLPKEETVDPNQKVIALTFDDGPNPATTNQIL 297
|.||:|::||..||.:.:.||::..:|.|||.||||||||||||||::||
BPUM_3090 246 KTKNQNEMKEPNPKRKAVKLPQKSKLDLNQKAIALTFDDGPNPATTSKIL 295
BSNT_02054___ 298 DSLKKYKGHATFFVLGSRVQYYPETLIRMLKEGNEVGNHSWSHPLLTRLS 347
::||:.|||||||||||||||||..|..:||.|||:||||:||||||||.
BPUM_3090 296 EALKENKGHATFFVLGSRVQYYPGMLADILKGGNEIGNHSYSHPLLTRLP 345
BSNT_02054___ 348 VKEALKQINDTQDIIEKISGYRPTLVRPPYGGINDELRSQMKMDVALWDV 397
:|||:||:.|||.:|||.|||.||..||||||.|..:...:.|.|:||||
BPUM_3090 346 LKEAVKQVKDTQKLIEKASGYTPTHFRPPYGGTNQNINQAVGMKVSLWDV 395
BSNT_02054___ 398 DPEDWKDRNKKTIVDRVMNQAGDGRTILIHDIYRTSADAADEIIKKLTDQ 447
||||||.||.:.|.:.|::.|.||||:|:||||.:||.||.:||.:||.|
BPUM_3090 396 DPEDWKVRNSQQITNHVLSHAADGRTVLMHDIYDSSAQAAVKIIHELTKQ 445
BSNT_02054___ 448 GYQLVTVSQLEEVKKQREAK---- 467
||||||||:|:|:||:|..:
BPUM_3090 446 GYQLVTVSELDELKKERHEQAPVQ 469
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