Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05194 and BPUM_3084

See DNA alignment / Visit BSNT_05194 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:51
# Commandline: needle
#    -asequence pep-align/BSNT_05194___slr.1.24716.seq
#    -bsequence pep-align/BPUM_3084.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05194___slr-BPUM_3084.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05194___slr-BPUM_3084.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05194___slr
# 2: BPUM_3084
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 156
# Identity:      98/156 (62.8%)
# Similarity:   120/156 (76.9%)
# Gaps:           4/156 ( 2.6%)
# Score: 500.0
# 
#
#=======================================

BSNT_05194___      1 MIGRIIRLYRKRKGYSINQLAVESGVSKSYLSKIERGVHTNPSVQFLKKV     50
                     |||::||:|||||||||.|||.::.||||||||||||||.||||||||||
BPUM_3084          1 MIGKVIRIYRKRKGYSIQQLAEDAHVSKSYLSKIERGVHRNPSVQFLKKV     50

BSNT_05194___     51 SATLEVELTELFDAETMMYEKISGGEEEWRVHLVQAVQAGMEKEELFTFT    100
                     |::||::|.|||||||||:.....||.|||.|:|.|||:||.||||:...
BPUM_3084         51 SSSLEIDLQELFDAETMMFHDAESGEHEWREHIVNAVQSGMPKEELYQLL    100

BSNT_05194___    101 NRLKKEQPE-TASYRNRKLTESNIEEWKALMAEAREIGLTVYEVKSFLKT    149
                     ...:|||.: |....:||||:|||.|||.||:||:.|||::.|||:||..
BPUM_3084        101 QTSRKEQEDRTLHVTHRKLTDSNISEWKGLMSEAKAIGLSIEEVKAFLAN    150

BSNT_05194___    150 MGR---    152
                     ||.   
BPUM_3084        151 MGERRA    156


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