Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05191 and BPUM_3081
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:51
# Commandline: needle
# -asequence pep-align/BSNT_05191___yveM.1.24716.seq
# -bsequence pep-align/BPUM_3081.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05191___yveM-BPUM_3081.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05191___yveM-BPUM_3081.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05191___yveM
# 2: BPUM_3081
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 624
# Identity: 374/624 (59.9%)
# Similarity: 463/624 (74.2%)
# Gaps: 26/624 ( 4.2%)
# Score: 1872.5
#
#
#=======================================
BSNT_05191___ 1 --------MIIALDTYLVLNSVIAGYQFLKD-SYQFYDSGALLLTAVSLL 41
:|:|||:||:|.:|..|:||::: :...|....|:::::|||
BPUM_3081 1 MTYAQRLSIIVALDSYLILVAVFFGFQFVQEAALTVYTFEMLVISSLSLL 50
BSNT_05191___ 42 LSYHVCAFLFNQYKQVWTYTGLGELIVLLKGITLSAAVTGIIQYAVYHTM 91
:.:|:.:::|:.|||||.|||:.||..|:|....|...:..:.|....|.
BPUM_3081 51 IGHHLFSYIFHVYKQVWAYTGVRELFSLMKTFVCSFLFSMAMLYLFVQTW 100
BSNT_05191___ 92 FFRLLTACWVLQLLSIGGTRILSRVLNESIRKKRCASSRALIIGAGSGGT 141
.||.|...|:..:|.||.:|:.||:|::..::.:....|||||||||.||
BPUM_3081 101 PFRFLFIVWLFHVLFIGASRMASRLLHDGAKRLQVEKERALIIGAGSAGT 150
BSNT_05191___ 142 LMVRQLLSKDEPDIIPVAFIDDDQTKHKLEIMGLPVIGGKESIMPAVQKL 191
::||||....:..|.||||||||:||||||||||||:||||.|..||..:
BPUM_3081 151 IIVRQLQQSSDVHIEPVAFIDDDKTKHKLEIMGLPVLGGKEQIQTAVVMM 200
BSNT_05191___ 192 KINYIIIAIPSLRTHELQVLYKECVRTGVSIKIMPHFDEMLLGTRTAGQI 241
.|..|||||||..:|.|:.||||||.|||..:|||..:::|.||....|:
BPUM_3081 201 DIQKIIIAIPSKSSHTLKGLYKECVATGVKTQIMPEMEQILKGTHALNQL 250
BSNT_05191___ 242 RDVKAEDLLGRKPVTLDTSEISNRIKGKTVLVTGAGGSIGSEICRQISAF 291
|||:.||||||:|:.||:|.:|..:||||::||||||||||||||||..|
BPUM_3081 251 RDVQPEDLLGREPIQLDSSRLSVHLKGKTIMVTGAGGSIGSEICRQICVF 300
BSNT_05191___ 292 QPKEIILLGHGENSIHSIYTELNGRFGKHIVFHTEIADVQDRDKMFTLMK 341
.|:.|:|:||||.|||||..||...:|..|..:.:|||:||:.||..::.
BPUM_3081 301 APQAIVLVGHGEFSIHSILLELKEIYGDTISLYPQIADIQDKQKMSEIVG 350
BSNT_05191___ 342 KYEPHVVYHAAAHKHVPLMEHNPEEAVKNNIIGTKNVAEAADMSGTETFV 391
:::|.::|||||||||||||.:|:|||||||||||||||||...|.||||
BPUM_3081 351 QFQPDMIYHAAAHKHVPLMEISPKEAVKNNIIGTKNVAEAAHEHGIETFV 400
BSNT_05191___ 392 LISSDKAVNPANVMGATKRFAEMIIMNLGKVSRTKFVAVRFGNVLGSRGS 441
|||||||||||||||||||||||:||.:|..|.|||||||||||||||||
BPUM_3081 401 LISSDKAVNPANVMGATKRFAEMLIMQMGASSDTKFVAVRFGNVLGSRGS 450
BSNT_05191___ 442 VIPIFKKQIEKGGPVTVTHPAMTRYFMTIPEASRLVIQAGALAKGRQIFV 491
||||||||||:||||||||||||||||||||||||||||||||:||||||
BPUM_3081 451 VIPIFKKQIEQGGPVTVTHPAMTRYFMTIPEASRLVIQAGALAEGRQIFV 500
BSNT_05191___ 492 LDMGEPVKIVDLAKNLIHLSGYTTEQVPIEFTGIRPGEKMYEELLNKNEV 541
|||||||||||||:||||||||||:|:||.||||||||||||||||::|.
BPUM_3081 501 LDMGEPVKIVDLAENLIHLSGYTTDQIPITFTGIRPGEKMYEELLNQHEK 550
BSNT_05191___ 542 HAEQIFPKIHIGKAVDGDWPVLMRFIEDFHKLPEADLRARLFAAINT--- 588
..||||||||||.|:|||..||.|||.:|..:.|..:|..|||||.:
BPUM_3081 551 AQEQIFPKIHIGHALDGDPYVLNRFIHEFDMMSEEQMREALFAAIESHDL 600
BSNT_05191___ 589 -SEEMTAASVH------------- 598
||:||.....
BPUM_3081 601 LSEQMTREGEALADEEKSLVLRNG 624
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