Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05176 and BPUM_3072
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:50
# Commandline: needle
# -asequence pep-align/BSNT_05176___yvfD.1.24716.seq
# -bsequence pep-align/BPUM_3072.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05176___yvfD-BPUM_3072.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05176___yvfD-BPUM_3072.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05176___yvfD
# 2: BPUM_3072
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 232
# Identity: 104/232 (44.8%)
# Similarity: 139/232 (59.9%)
# Gaps: 19/232 ( 8.2%)
# Score: 502.5
#
#
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BSNT_05176___ 1 ---MKN----------VAIVGDGGHGKVIRELINARSDTRLAAVLDDKFK 37
:|| :.::|.|||.|||:|:|.|..|..|.|||||:|:
BPUM_3072 1 MPQLKNSKEPICKEQPIGLIGAGGHSKVIQEMIAAHPDYSLCAVLDDQFE 50
BSNT_05176___ 38 TFEGGKEWYTGPPEAVTELRRLIPDVLFLIAVGNNSVRKQLAERLGLRKD 87
..........||.....|||..||.:.:|||:|.|..|:.:.|||.....
BPUM_3072 51 ETTTKSSILYGPISMSQELRETIPHMKWLIAIGQNESRQLVKERLAFGNT 100
BSNT_05176___ 88 DFITLIHPSAIVSRSAVIGEGTVIMAGAIIQADARIGAHCIINTGAVAEH 137
.|.|||||.|:||.||:||.|.|:||.|::||||.||.|.|||||::.||
BPUM_3072 101 AFATLIHPRAVVSPSAIIGRGAVVMATAVVQADAAIGEHAIINTGSIVEH 150
BSNT_05176___ 138 DNQISDYVHLSPRVTLSGAVSVQEGAHVGTGASVIPQITIGAWSIVGAGS 187
|..:..:|||||...|:|.|||::|.|:|.||.|||..:||:|:|:|||:
BPUM_3072 151 DCILESFVHLSPGAVLTGCVSVRKGTHIGAGAVVIPGTSIGSWTIIGAGA 200
BSNT_05176___ 188 AVIRPIPDRVTAAGAPARIISSIQTSNKG--- 216
.|.:.|.|:..|.|.||| .|:...:|
BPUM_3072 201 TVTKDIHDQKVAVGIPAR---EIKDRREGGGK 229
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