Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_05117 and BPUM_3043
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:46
# Commandline: needle
# -asequence pep-align/BSNT_05117___opuCA.1.24716.seq
# -bsequence pep-align/BPUM_3043___opuCA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_05117___opuCA-BPUM_3043___opuCA.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05117___opuCA-BPUM_3043___opuCA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05117___opuCA
# 2: BPUM_3043___opuCA
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 387
# Identity: 314/387 (81.1%)
# Similarity: 349/387 (90.2%)
# Gaps: 12/387 ( 3.1%)
# Score: 1623.0
#
#
#=======================================
BSNT_05117___ 1 MLKLEQVSKVYKGGKKAVNSIDLDIAKGEFICFIGPSGCGKTTTMKMINR 50
|||||.|||.||||||||.:||||||||||||||||||||||||||||||
BPUM_3043___o 1 MLKLENVSKTYKGGKKAVKNIDLDIAKGEFICFIGPSGCGKTTTMKMINR 50
BSNT_05117___ 51 LIEPSSGRIFIDGENIMEQDPVELRRKIGYVIQQIGLFPHMTIQQNISLV 100
|||||||.|||:|||||::|||:|||:||||||||||||||||.||||||
BPUM_3043___o 51 LIEPSSGNIFIEGENIMKKDPVQLRREIGYVIQQIGLFPHMTIAQNISLV 100
BSNT_05117___ 101 PKLLKWPEEKRKERARELLKLVDMGPEYLDRYPYELSGGQQQRIGVLRAL 150
|||||||||||.|||||||||||||||:|:|||:||||||||||||||||
BPUM_3043___o 101 PKLLKWPEEKRNERARELLKLVDMGPEFLERYPHELSGGQQQRIGVLRAL 150
BSNT_05117___ 151 AAEPPLILMDEPFGALDPITRDSLQEEFKKLQRTLNKTIVFVTHDMDEAI 200
||||||||||||||||||||||:|||||||||:|||||||||||||||||
BPUM_3043___o 151 AAEPPLILMDEPFGALDPITRDTLQEEFKKLQKTLNKTIVFVTHDMDEAI 200
BSNT_05117___ 201 KLADRIVILKAGEIVQVGTPDEILRNPANEFVEEFIGKERLIQSRPDIER 250
||||||||||.|||||||||::|||||||||||||||||||:||.|::||
BPUM_3043___o 201 KLADRIVILKDGEIVQVGTPEDILRNPANEFVEEFIGKERLLQSNPNMER 250
BSNT_05117___ 251 VEQMMNRTPVTVSADKTLSQAIQLMREKRVDSLLVVDRQNVLKGYVDVEM 300
||||||.:|||::.::||:.||.:|||||||||||||...|||||:|:|.
BPUM_3043___o 251 VEQMMNTSPVTITVEQTLTDAIYIMREKRVDSLLVVDENGVLKGYIDIET 300
BSNT_05117___ 301 IDQNRKKASIVGDVYRSDIYTVQKGALLRDTVRKILKQGIKYVPVVDEQN 350
||.||:||:.||::..::.||||:||||||||||||.:|||||||||.:.
BPUM_3043___o 301 IDANRRKAAFVGEILNTEFYTVQEGALLRDTVRKILIRGIKYVPVVDAKG 350
BSNT_05117___ 351 HLAGIVTRASLVDIVYDSIWGD-------EENQLMTI 380
||.||||||||||:|||||||| |.|
BPUM_3043___o 351 HLKGIVTRASLVDVVYDSIWGDDTPASAIEMN----- 382
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