Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05102 and BPUM_3037

See DNA alignment / Visit BSNT_05102 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:46
# Commandline: needle
#    -asequence pep-align/BSNT_05102___yvaN.1.24716.seq
#    -bsequence pep-align/BPUM_3037.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05102___yvaN-BPUM_3037.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05102___yvaN-BPUM_3037.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05102___yvaN
# 2: BPUM_3037
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 137
# Identity:      73/137 (53.3%)
# Similarity:    96/137 (70.1%)
# Gaps:           5/137 ( 3.6%)
# Score: 363.5
# 
#
#=======================================

BSNT_05102___      1 MESFGEQLRALREERKLTVNQLATYSGVSAAGISRIENGKRGVPKPATIK     50
                     |..||||||.|||.||::|||||.||||||||||||||||||||||.|||
BPUM_3037          1 MNHFGEQLRILRENRKMSVNQLAMYSGVSAAGISRIENGKRGVPKPLTIK     50

BSNT_05102___     51 KLAEALKIPYEGLMYKAGYI--EEVHEARAPYETKCKLLEKAEAYDLKNL     98
                     |||.|||:|||.||..||:|  |:|||.:..||:..|:.:.|...|:::|
BPUM_3037         51 KLAHALKVPYEDLMLLAGHIEQEQVHEMKPKYESVLKIYQTALQKDVEHL    100

BSNT_05102___     99 ALLENEKWQYLNKEDLLMLDHYFSFISDEAKKRSADD    135
                     .:.:.:.|:.|:.:|:..|:.||..:.::.|...   
BPUM_3037        101 PMFDGDLWERLSAQDISQLNEYFLTLINQKKTNK---    134


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