Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_05092 and BPUM_3031

See DNA alignment / Visit BSNT_05092 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:45
# Commandline: needle
#    -asequence pep-align/BSNT_05092___rnrrnr.1.24716.seq
#    -bsequence pep-align/BPUM_3031___rnr.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_05092___rnrrnr-BPUM_3031___rnr.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_05092___rnrrnr-BPUM_3031___rnr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05092___rnrrnr
# 2: BPUM_3031___rnr
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 782
# Identity:     630/782 (80.6%)
# Similarity:   702/782 (89.8%)
# Gaps:           5/782 ( 0.6%)
# Score: 3276.5
# 
#
#=======================================

BSNT_05092___      1 MEKEAFMEKLLSFMKEEAYKPLTVQELEEMLNITEAEEFKELVKALVALE     50
                     |:||.||::||:|||:||||||||||||.|:.||..:::||||||||.||
BPUM_3031___r      1 MQKEEFMDELLAFMKDEAYKPLTVQELEVMMEITNPDDYKELVKALVILE     50

BSNT_05092___     51 EKGLIVRTRSDRYGIPEKMNLIKGKISAHAKGFAFLLPEDTSLSDVFIPP    100
                     ::||||||||||||:||||||||||:|||||||||:.||:....|:||||
BPUM_3031___r     51 DQGLIVRTRSDRYGVPEKMNLIKGKLSAHAKGFAFVTPEEFGQDDIFIPP    100

BSNT_05092___    101 NELNTAMNGDIVMVRLNSQSSGSRQEGTVIRILERAIQRVVGTYTETRNF    150
                     |||.||||||.||||::.:|:|:::||||||||||..|.||||||||::|
BPUM_3031___r    101 NELGTAMNGDTVMVRVSHKSNGTKKEGTVIRILERNTQTVVGTYTETKSF    150

BSNT_05092___    151 GFVIPDDKKITSDIFIPKNGKNGAAEGHKVVVKLTSYPEGRMNAEGEVET    200
                     |||||||||||:||||||:.||||.|||||||.|||||||||:|||||..
BPUM_3031___r    151 GFVIPDDKKITTDIFIPKSAKNGAVEGHKVVVTLTSYPEGRMSAEGEVTE    200

BSNT_05092___    201 ILGHKNDPGIDILSVIHKHGLPGEFPADAMEQASSTPDTIDEKDLKDRRD    250
                     ||||||||||||||:|||||||||||.:|::||..||:|||||||:.|||
BPUM_3031___r    201 ILGHKNDPGIDILSIIHKHGLPGEFPEEALQQAVDTPETIDEKDLEGRRD    250

BSNT_05092___    251 LRDQVIVTIDGADAKDLDDAVTVTKLDDGSYKLGVHIADVSHYVTENSPI    300
                     ||::.||||||||||||||||||.|||||.||||||||||||||||||||
BPUM_3031___r    251 LRNETIVTIDGADAKDLDDAVTVQKLDDGKYKLGVHIADVSHYVTENSPI    300

BSNT_05092___    301 DKEALERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMTINSQ    350
                     |:||.||||||||||||||||||||||||||||||||||||||||.|:..
BPUM_3031___r    301 DQEAYERGTSVYLVDRVIPMIPHRLSNGICSLNPKVDRLTLSCEMVIDRN    350

BSNT_05092___    351 GQVTEHEIFQSVIKTTERMTYSDVNKILVDDDEELKQKYEPLVPMFKDME    400
                     |:|.:|||||||||||||||||||||||||.||||..|||||||||::||
BPUM_3031___r    351 GKVVKHEIFQSVIKTTERMTYSDVNKILVDQDEELLDKYEPLVPMFQEME    400

BSNT_05092___    401 RLAQILRDKRMDRGAVDFDFKEAKVLVDDEGAVKDVVIRERSVAEKLIEE    450
                     :||:|||:|||:||||||||||||||||:|||.||||:||||||||||||
BPUM_3031___r    401 KLAEILREKRMERGAVDFDFKEAKVLVDEEGAAKDVVVRERSVAEKLIEE    450

BSNT_05092___    451 FMLVANETVAEHFHWMNVPFIYRIHEEPNAEKLQKFLEFVTTFGYVVKGT    500
                     |||||||||||||||||||||||||||||.||||:||||||||||:||||
BPUM_3031___r    451 FMLVANETVAEHFHWMNVPFIYRIHEEPNPEKLQRFLEFVTTFGYIVKGT    500

BSNT_05092___    501 AGNIHPRALQSILDAVRDRPEETVISTVMLRSMKQAKYDPQSLGHFGLST    550
                     :.|||||||||:||||||:|||.||.||||||||||||||:|:|||||||
BPUM_3031___r    501 STNIHPRALQSVLDAVRDQPEEVVIQTVMLRSMKQAKYDPESIGHFGLST    550

BSNT_05092___    551 EFYTHFTSPIRRYPDLIVHRLIRTYLINGKVDEATQEKWAERLPDIAEHT    600
                     |||||||||||||||||||||||||||..|.||||.|||.:.||:||:|.
BPUM_3031___r    551 EFYTHFTSPIRRYPDLIVHRLIRTYLIQKKTDEATLEKWGQLLPEIADHA    600

BSNT_05092___    601 SSMERRAVDAERETDDLKKAEYMLDKIGEEFDGMISSVTNFGMFVELPNT    650
                     |:||||:||||||||||||||:||||||||||||||||||||:|||||||
BPUM_3031___r    601 STMERRSVDAERETDDLKKAEFMLDKIGEEFDGMISSVTNFGLFVELPNT    650

BSNT_05092___    651 IEGLVHVSFMTDDYYRFDEQHFAMIGERTGNVFRIGDEITVKVVDVNKDE    700
                     ||||||||:|||||||||||||||||||||||:|||||||||||:|||||
BPUM_3031___r    651 IEGLVHVSYMTDDYYRFDEQHFAMIGERTGNVYRIGDEITVKVVNVNKDE    700

BSNT_05092___    701 RNIDFEIVGMKGTPRRPRELDSSRSRKRGKPARKRVQSTNTPVSPAPSEE    750
                     .:||||||||||| ||....|....::...||:|.....|.....| .|:
BPUM_3031___r    701 HSIDFEIVGMKGT-RRKSPKDFKFKKRTDSPAKKGRGGQNASGDKA-KED    748

BSNT_05092___    751 KG--EWFT-KPKKKKKKRGFQNAPKQKRKKKK    779
                     ||  :||| :.|||||||.|.|||||||||||
BPUM_3031___r    749 KGGSDWFTGRKKKKKKKRVFDNAPKQKRKKKK    780


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_05092 and BPUM_3031

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
