Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04969 and BPUM_2994

See DNA alignment / Visit BSNT_04969 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:42
# Commandline: needle
#    -asequence pep-align/BSNT_04969___fhuD.1.24716.seq
#    -bsequence pep-align/BPUM_2994.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04969___fhuD-BPUM_2994.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04969___fhuD-BPUM_2994.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04969___fhuD
# 2: BPUM_2994
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 326
# Identity:     158/326 (48.5%)
# Similarity:   213/326 (65.3%)
# Gaps:          25/326 ( 7.7%)
# Score: 801.5
# 
#
#=======================================

BSNT_04969___      1 MTHIYKKLGAAFFALLLIAAL----AACGNNSESKGSASDSKGAETFTYK     46
                           ....:.|.|:.:|.|    .||.:.|..|..|:..   :|.||:
BPUM_2994          1 ------MKNRSGFLLISLAILMLFTVACSSTSNKKSGANQD---DTITYQ     41

BSNT_04969___     47 AENGNVKIPKHPKRVVVMADGYYGYFKTLGINVVGAPENVFKNPYYKGKT     96
                     ...|.||:||.|||:|::|:.|||...|||...:.|...:||||:|||||
BPUM_2994         42 DVKGEVKLPKDPKRIVLLAESYYGDLVTLGKTPIAATAPIFKNPFYKGKT     91

BSNT_04969___     97 DGVENIGDGTSVEKVIDLNPDLIIVWTTQGADIK--KLEKIAPTVAVKYD    144
                     |||:|:|...|||||..|.||:||.|   |.|.|  :.:|||.|||:||:
BPUM_2994         92 DGVKNLGTTPSVEKVAALKPDMIIAW---GEDEKFDQYKKIATTVAIKYN    138

BSNT_04969___    145 KLDNIEQLKEFAKMTGTEDKAEKWLAEWDKKVAAAKTKIKKAVGDKTISI    194
                     :....:|||||.|||||..||.:|:.:||.|::..|.|:.||:|:||:||
BPUM_2994        139 QYSFKDQLKEFGKMTGTPKKATEWITKWDTKISEVKPKVTKAIGNKTVSI    188

BSNT_04969___    195 MQTNGKDIYVFGKDFGRGGSIIYKDLGLQATKLTKEKAIDQGPGYTSISL    244
                     :....|.||:||..|.|||.|||.:|.|:|.|..|:.|||.|.||.:|||
BPUM_2994        189 VSPFDKGIYIFGNTFARGGEIIYDELKLRAPKAVKKDAIDSGVGYANISL    238

BSNT_04969___    245 EKLPDFAGDYIFAGPW---QSGGDDGGVFDSSIWKNLNAVKNGHVYKIDP    291
                     ||||::|||:||..||   :|.||.  |::||||.:|.||:|.||::|||
BPUM_2994        239 EKLPEYAGDFIFTSPWSGSKSKGDQ--VYESSIWASLPAVQNKHVFEIDP    286

BSNT_04969___    292 IGFYFTDPISLEGQLEYITESLTK--    315
                     :|::|.||:|||||||:|.:.||.  
BPUM_2994        287 VGYFFNDPVSLEGQLEFIVDRLTSAS    312


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