Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_02097 and BPUM_2986

See DNA alignment / Visit BSNT_02097 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:32
# Commandline: needle
#    -asequence pep-align/BSNT_02097___exuR.1.24716.seq
#    -bsequence pep-align/BPUM_2986.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_02097___exuR-BPUM_2986.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_02097___exuR-BPUM_2986.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02097___exuR
# 2: BPUM_2986
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 337
# Identity:     205/337 (60.8%)
# Similarity:   267/337 (79.2%)
# Gaps:           5/337 ( 1.5%)
# Score: 1107.0
# 
#
#=======================================

BSNT_02097___      1 -MVTIKDIAKLANVSHTTVSRALNNSPYIKEHTKKKILELAEQLNYTPNV     49
                      .|||||||||||||||||||||||||:|||.||:|||.:|:||||:|||
BPUM_2986          1 MTVTIKDIAKLANVSHTTVSRALNNSPFIKEKTKQKILSIAKQLNYSPNV     50

BSNT_02097___     50 NAKSLAMQKSHTIGLFFTSITNGTSHSFFADTIKGVNQAISEDYNLYVRG     99
                     :|:.|..|||.||||||||:|.|||.|||.|.:||||..::|.|||:|||
BPUM_2986         51 HARGLVSQKSFTIGLFFTSLTEGTSSSFFVDALKGVNSVMTEHYNLFVRG    100

BSNT_02097___    100 IDDLKNYDSVTPMRYDGIILMSQSDIDNSFIYHIREKNIPLVVLNRDIDD    149
                     |||..:|.::...|||||:|||||:.|.:||:|::::.||::||||.::.
BPUM_2986        101 IDDFHDYTTIHKQRYDGILLMSQSEHDEAFIHHVKKQGIPIIVLNRRVES    150

BSNT_02097___    150 RTITNILSNDKEGSQEAVEYFIQSGHQDIAIIEGIEGFKSSQQRKEGYLS    199
                     ..:.|||::|.:|:.:|..||||.|||.||||||.|||||:|:||.|:|.
BPUM_2986        151 HEVMNILADDSQGAYQAAHYFIQQGHQQIAIIEGKEGFKSTQERKAGFLQ    200

BSNT_02097___    200 ALIQHHIPIKHEYSVKGQYDMESGFQAMERLLALPNPPTAVFCSNDDMAI    249
                     |||.||||:|.||.:||.|.|:||:::||.||.|.:||||:|||||||||
BPUM_2986        201 ALIDHHIPMKKEYMIKGDYHMKSGYESMESLLTLDHPPTALFCSNDDMAI    250

BSNT_02097___    250 GAMNAIFAKGLRVPDDISVIGFDDIGFSQYITPRLTTVKRPVEKISVLGA    299
                     |||||::|||...|.|:|:||||||.||.|.||.|||||:|:||:..|||
BPUM_2986        251 GAMNALYAKGKTCPGDVSIIGFDDIAFSSYTTPALTTVKKPIEKMCALGA    300

BSNT_02097___    300 QKLLSLIS---EPETKAEKILENTKFMVRDSVRRLTT    333
                     ..:||:|:   :.|...||:..:|:.|:||||:::. 
BPUM_2986        301 DAILSVINGEEQEEDHMEKMYVHTELMIRDSVKKVQ-    336


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