Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04908 and BPUM_2951

See DNA alignment / Visit BSNT_04908 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:38
# Commandline: needle
#    -asequence pep-align/BSNT_04908.1.24716.seq
#    -bsequence pep-align/BPUM_2951.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04908-BPUM_2951.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04908-BPUM_2951.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04908
# 2: BPUM_2951
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 282
# Identity:     131/282 (46.5%)
# Similarity:   172/282 (61.0%)
# Gaps:          54/282 (19.1%)
# Score: 685.5
# 
#
#=======================================

BSNT_04908         0 --------------------------------------------------      0
                                                                       
BPUM_2951          1 MKRTAIVTGANSGFGKLITIGLAKQGYTVIAGVRQEANAKKLAEEIEQAS     50

BSNT_04908         1 MSDSIHITALDVTDEQSIVSFGKAISAYAPIDLLVNNAGTAYGGFIEDVP     50
                     :|::|||.||||||.|||..|.|.:..||||.||||||||||.||.|:||
BPUM_2951         51 LSEAIHIAALDVTDTQSIQVFQKKLHTYAPITLLVNNAGTAYAGFAEEVP    100

BSNT_04908        51 MEHFREQFETNVFGVIHVTKTVLPYIRKHGGAKIINVSSISGLTGFPALS    100
                     ::.||:||..|||||:.||:.|||::.  .||||.|:||||||.|.||||
BPUM_2951        101 VDTFRQQFNVNVFGVMEVTQAVLPFMT--NGAKIFNMSSISGLMGMPALS    148

BSNT_04908       101 PYVSSKHALEGFSESLRIELLPFGIETALIEPGSYKTSIWSTSLSNFMSV    150
                     ||||||.||||::|||||||..|||:.|||||||::|:||:||::..|..
BPUM_2951        149 PYVSSKFALEGYTESLRIELASFGIQAALIEPGSFQTNIWNTSMNEHMLQ    198

BSNT_04908       151 PADDSAYHQYYKKILSYVQKTGEESGDPQEVADLIYQLATKQHIKKLRYP    200
                     |.:.|.|...|:|:::::.......|||:|||:|:.:||.|:.:||||||
BPUM_2951        199 PEEGSKYIHLYQKMMAHINAQKSNYGDPREVAELVIRLAEKKRLKKLRYP    248

BSNT_04908       201 IGKGIKLTLLFRSLFPWSAWESILKKKLFK--    230
                     ||||::|:...:.|.|||.||.|:.:.|..  
BPUM_2951        249 IGKGVRLSFTAKQLLPWSMWEKIILRTLSSKK    280


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