Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04884 and BPUM_2948

See DNA alignment / Visit BSNT_04884 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:37
# Commandline: needle
#    -asequence pep-align/BSNT_04884.1.24716.seq
#    -bsequence pep-align/BPUM_2948.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04884-BPUM_2948.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04884-BPUM_2948.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04884
# 2: BPUM_2948
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 84
# Identity:      58/84 (69.0%)
# Similarity:    70/84 (83.3%)
# Gaps:           3/84 ( 3.6%)
# Score: 302.0
# 
#
#=======================================

BSNT_04884         1 MEQKLQEQLDGLLEKYTELLLGETNDELKEEVKQWILYTHIAKSMPPLAK     50
                     |..:|.::|:|||||||||||||:.|.||:||||||:|:|||||||||||
BPUM_2948          1 MGNELDQKLEGLLEKYTELLLGESTDALKQEVKQWIIYSHIAKSMPPLAK     50

BSNT_04884        51 HWNATYPDAKQGIKEIIQHIKELNEAHR-NKQ--     81
                     |:|.|||:||:.||..||.||:|||||| ||.  
BPUM_2948         51 HFNETYPEAKEEIKHTIQRIKQLNEAHRANKGKF     84


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