Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_01398 and BPUM_2905
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:59
# Commandline: needle
# -asequence pep-align/BSNT_01398.1.24716.seq
# -bsequence pep-align/BPUM_2905.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_01398-BPUM_2905.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_01398-BPUM_2905.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01398
# 2: BPUM_2905
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 429
# Identity: 87/429 (20.3%)
# Similarity: 156/429 (36.4%)
# Gaps: 149/429 (34.7%)
# Score: 185.0
#
#
#=======================================
BSNT_01398 1 MSEALTEQKGQKWAISLFTIGVFMAALDNGIISAALTTINESFAVSPSWG 50
.::.|:.:.:.| .:|:|.|..|:|...:.:..|:|
BPUM_2905 1 -----MKKMGRLYILML---NIFIAMLGFGLIVPVMPSYIEAF------- 35
BSNT_01398 51 SWGITLYTLGLSVSV---------PIVGKLSDRYGRKKLFLIEVCLFGLG 91
|.|..|||..|:. |:.|.|:||:||:||.:..:..|.:.
BPUM_2905 36 --GATGKTLGFLVAATGLTQFALSPVAGALTDRFGRRKLIIAGIAGFTIA 83
BSNT_01398 92 SLLVALSQSFPLFLISRLIQALGG--GGIFIIGSSHILATLPKEK-QGKA 138
..:.|.:....:..:||. ||| |.:.:......:|.:..|| :||.
BPUM_2905 84 QFIFAFADQLWMLFVSRF---LGGAAGALLMPAMFAYIADITSEKDRGKG 130
BSNT_01398 139 LGLLGAMNGMAAVLGPNIGSFLLDWTGSWHWLFLINLPIAVLLVVFGSYF 188
:||..|...:..|:||.:|.:|:::..::. |||....|.|..:....|
BPUM_2905 131 MGLFSAAMTLGFVIGPGVGGYLVEYGIAFP--FLIAGSFAALSTLLSILF 178
BSNT_01398 189 IAET----KAPEAK---------------RLDAAGIFLLSLSILAVMYGM 219
:.|| |..||: .|..:..||..|:.: :.:|:
BPUM_2905 179 LPETLTKEKQEEARLNKDIHFNPFVQMMQALKTSYGFLFILAFV-LNFGI 227
BSNT_01398 220 TNLDG-----VNLLHSLGNPEVYGCI----IFGILCFAALI-SYEKRV-E 258
.:.:. |:..|.....::...| :.|:|...||: ::.||. |
BPUM_2905 228 IHFESIFGLYVDQKHGFTPKDIAFVITVAGLAGVLVQGALVNAFVKRFGE 277
BSNT_01398 259 MRGGDPILAYSLLRNHMFQRTLII-------GLLSGGLLAAVIFI--PSY 299
|| ::.|:||...:. ||: .|:..| :::|: .|:
BPUM_2905 278 MR----VVRYALLGAALM---LIVCRIAPSFWLIFAG---SILFLSATSF 317
BSNT_01398 300 VEQYLGVPAAK-AGY----------------------------------- 313
|...|....:| ||.
BPUM_2905 318 VRPALNTLLSKMAGNQQGVAGGLNTSFMSLANIVGPSLAGILFDVNIEFP 367
BSNT_01398 313 ----------------------------- 313
BPUM_2905 368 FMFGTFVLCISFIASIVWGKKVQQRSVIS 396
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