Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04784 and BPUM_2897

See DNA alignment / Visit BSNT_04784 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:33
# Commandline: needle
#    -asequence pep-align/BSNT_04784___yunA.1.24716.seq
#    -bsequence pep-align/BPUM_2897.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04784___yunA-BPUM_2897.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04784___yunA-BPUM_2897.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04784___yunA
# 2: BPUM_2897
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 327
# Identity:     235/327 (71.9%)
# Similarity:   276/327 (84.4%)
# Gaps:           2/327 ( 0.6%)
# Score: 1350.0
# 
#
#=======================================

BSNT_04784___      1 MKVLLSALLLL-LFAFEPSVSGKKLSDPVLSKRMELYHKIEAVTQIPWYA     49
                     |||:|:.::.| :........|:.....||.:||.||.|:...||:|||.
BPUM_2897          1 MKVVLAIIIALSMLPLPVHAQGEGKQQDVLKQRMALYEKVAITTQVPWYV     50

BSNT_04784___     50 LAAVDQYEENVRSNRKDLPEKAGIISIYIPDDIWSGPENPNPKDDAPLSI     99
                     ||||||||.|:|.:|:|||::.|:|.||||.::|.||||||.:|.:||||
BPUM_2897         51 LAAVDQYEHNIRKSRRDLPKQKGVIGIYIPREMWIGPENPNKQDTSPLSI    100

BSNT_04784___    100 KVFDGIGMDGDGDGKAEVSNDEDILYTFSQYLLSYGTDEDNIRIGLWNYY    149
                     |||||||:||:|||||...:|||:|:||:||||.||...|.::|.||:||
BPUM_2897        101 KVFDGIGLDGNGDGKASSDDDEDVLFTFAQYLLHYGNSIDQLKIALWDYY    150

BSNT_04784___    150 RRDQTVGIISEFMKLFKAYGHIDLGEHAFPLPIRTDYSYRSTWGDARGFG    199
                     .|||||||||.||||::.|||:|||:||||||:..|||||||||||||||
BPUM_2897        151 GRDQTVGIISSFMKLYQHYGHLDLGKHAFPLPVGADYSYRSTWGDARGFG    200

BSNT_04784___    200 GRRIHEGTDIFAHYGLPVKSTCYGVVEMKGWNRFGGWRIGIRDINNTYHY    249
                     |||||||||:||||||||::|.|||:||||||||||||||||||:|.|||
BPUM_2897        201 GRRIHEGTDLFAHYGLPVRATSYGVIEMKGWNRFGGWRIGIRDIHNHYHY    250

BSNT_04784___    250 FAHLNGFAKGIKTGQIVEPGQVIGSVGSSGYGPPGTAGKFPPHLHYGMYK    299
                     ||||||||||:|||||||||||||||||||||||||||||||||||||||
BPUM_2897        251 FAHLNGFAKGLKTGQIVEPGQVIGSVGSSGYGPPGTAGKFPPHLHYGMYK    300

BSNT_04784___    300 DNGRTEWSFDPYPHLRAWERYEYQKKK    326
                     ||||||||||||||||||||.|.::. 
BPUM_2897        301 DNGRTEWSFDPYPHLRAWERAERKRH-    326


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.