Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04771 and BPUM_2886

See DNA alignment / Visit BSNT_04771 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:32
# Commandline: needle
#    -asequence pep-align/BSNT_04771___thrB.1.24716.seq
#    -bsequence pep-align/BPUM_2886___thrB.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04771___thrB-BPUM_2886___thrB.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04771___thrB-BPUM_2886___thrB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04771___thrB
# 2: BPUM_2886___thrB
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 310
# Identity:     225/310 (72.6%)
# Similarity:   269/310 (86.8%)
# Gaps:           1/310 ( 0.3%)
# Score: 1190.0
# 
#
#=======================================

BSNT_04771___      1 MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWSFEAET     50
                     |::|.||||:||||||||||||||||||||||||||:||:.|.|.||||:
BPUM_2886___t      1 MSKASMLFSITVPGSTANLGPGFDSVGMALSRYLKLSVFDHDSWLFEAES     50

BSNT_04771___     51 ETVAGIPAGTDNLIYQVAKRTADLYGKEMPPVHVKVWSDIPLARGLGSSA    100
                     :.|:|||.||||||||.||:.||.:||.:|||:|||||||||||||||||
BPUM_2886___t     51 DVVSGIPPGTDNLIYQTAKKVADHFGKTLPPVYVKVWSDIPLARGLGSSA    100

BSNT_04771___    101 AAIVAAIELADELCGLKLSEADKLHLASLEEGHPDNAGASLVGGLVIGLH    150
                     ||||||||||::|..|.:::..||..||..|||||||||||.|||:||||
BPUM_2886___t    101 AAIVAAIELANQLLELNMTDDQKLFFASEVEGHPDNAGASLFGGLLIGLH    150

BSNT_04771___    151 EDDETQMIRVPNADIDVVVVIPFYEVLTRDARDVLPKEFPYADAVKASAV    200
                     |:|:|..::|.:.|||||||||||||||:|||||||::|.|..||.||||
BPUM_2886___t    151 EEDKTHAVKVKHVDIDVVVVIPFYEVLTKDARDVLPEDFSYKHAVSASAV    200

BSNT_04771___    201 SNILIAAIMSKDWPLVGKIMKKDMFHQPYRAMLVPELSKVEHVAEMKGAY    250
                     ||:|:||:|:::|||||::|.||:||||||.|||||||||||||.:||||
BPUM_2886___t    201 SNVLVAALMTQNWPLVGEMMNKDLFHQPYRTMLVPELSKVEHVASLKGAY    250

BSNT_04771___    251 GTALSGAGPTILVMTEKGKGEELKEQLALHFPHCEVDALTVPKEGSIIER    300
                     ||||||||||||.:.||||||.||:|||.:|||||||.||||.||.::|.
BPUM_2886___t    251 GTALSGAGPTILTLIEKGKGEGLKKQLAQNFPHCEVDLLTVPVEGVVVEH    300

BSNT_04771___    301 NPLYQVKSV-    309
                     :|:.|||:| 
BPUM_2886___t    301 DPVNQVKNVL    310


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