Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04693 and BPUM_2859

See DNA alignment / Visit BSNT_04693 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:29
# Commandline: needle
#    -asequence pep-align/BSNT_04693___yukD.1.24716.seq
#    -bsequence pep-align/BPUM_2859___yukD.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04693___yukD-BPUM_2859___yukD.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04693___yukD-BPUM_2859___yukD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04693___yukD
# 2: BPUM_2859___yukD
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 79
# Identity:      60/79 (75.9%)
# Similarity:    69/79 (87.3%)
# Gaps:           0/79 ( 0.0%)
# Score: 315.0
# 
#
#=======================================

BSNT_04693___      1 MYIDITIDLKHYNGSVFDLRLSDYHPVKKVIDIAWQAQSVSMPPREGHWI     50
                     ||||||||||:|:|||||||||:|..:|:||.|||||:.:|:|.|||.|:
BPUM_2859___y      1 MYIDITIDLKNYDGSVFDLRLSNYLHIKQVIHIAWQAKQISLPKREGGWV     50

BSNT_04693___     51 RVVNKDKVFSGECKLSDCGITNGDRLEIL     79
                     |||||..|||||.||||||||.|||||||
BPUM_2859___y     51 RVVNKKAVFSGEYKLSDCGITTGDRLEIL     79


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