Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
Amino acid alignment: BSNT_04688 and BPUM_2856
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:28
# Commandline: needle
# -asequence pep-align/BSNT_04688___yueB.1.24716.seq
# -bsequence pep-align/BPUM_2856.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile pep-align/BSNT_04688___yueB-BPUM_2856.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04688___yueB-BPUM_2856.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04688___yueB
# 2: BPUM_2856
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1068
# Identity: 477/1068 (44.7%)
# Similarity: 682/1068 (63.9%)
# Gaps: 112/1068 (10.5%)
# Score: 2330.5
#
#
#=======================================
BSNT_04688___ 1 MTEQRKSLIKLISAVIIILLLPVLFFRFIGDDPTKKAVNSTRQIAVVNED 50
||||:||.||:||.:|:||:||||||..|||||.|:..|:||.|||||||
BPUM_2856 1 MTEQQKSSIKIISTMILILVLPVLFFHLIGDDPAKQKKNATRNIAVVNED 50
BSNT_04688___ 51 TGVLSDEVKSDEEDKSAQFGKEVAAVLGERPDYSWTVVNRSAAETGLASK 100
.| :.|.:.:|:||::|.|.|.|||||:||||||||||.||.|:
BPUM_2856 51 MG-------ASESENTARFGQDVVAALSERPDYTWTVVNRSAAENGLKSR 93
BSNT_04688___ 101 KYDAIVYIPSDFSKNILSYDKDHPQKATLEFSIQDNLNAVNKEKVQRELE 150
||||::|||||||||:||||||||:||:::|||||.||:|||||||||||
BPUM_2856 94 KYDAVLYIPSDFSKNVLSYDKDHPEKASIQFSIQDQLNSVNKEKVQRELE 143
BSNT_04688___ 151 DAQKTMNKKMSALYWNFVSQKVDNIRGEFDKIVNKESEFQNVMYNFYKPS 200
:|||.||::||.|||:||||::.|:|.||:.||.||.||||.|||||||:
BPUM_2856 144 NAQKKMNEQMSTLYWSFVSQEIGNVREEFEHIVGKEVEFQNTMYNFYKPN 193
BSNT_04688___ 201 SNDLAGEIKQQKDLIDELKKSMNEAQGTTKEKASTAEEAKNTLKEFIDTV 250
||.|:..::|||..|:|||.:|.::|...|:..||.|||||.||:|:..|
BPUM_2856 194 SNKLSDAVQQQKKQIEELKNAMTDSQKQYKDGLSTTEEAKNQLKDFVKVV 243
BSNT_04688___ 251 ERYKEYQENQKKLLLAAQDSTQQQIRTGLDAIQ--AQQKANQFSERMSGL 298
::|::||:.||.||:.||.:.|:||:.||..:. ..|.|..||::|.||
BPUM_2856 244 DQYQQYQDKQKDLLIKAQSTNQKQIQQGLKQLADIQNQNARSFSDQMGGL 293
BSNT_04688___ 299 ATGIGQAKTQLGLTSLALKSAEQTRQGQVPLQEMGMKKIQEDMFSTFLER 348
.|.|...::||..|..|:::.:::|:..:|.|..|:.::.:......:::
BPUM_2856 294 KTDINGVQSQLNTTDSAIQTVQKSREDAIPKQSTGLTELVKTSQEELIKK 343
BSNT_04688___ 349 YETQYTATKIQNLNQLQDKIVNLRPALIKPEEDDQKHDNSNEENNDKEED 398
||.:|.......::.||.|::..|..|: :|.:...|:.::..:|::.:
BPUM_2856 344 YEDRYLEDYRNKISALQTKLLAKRQELM--DEPEPPVDSEDDGQSDQDNE 391
BSNT_04688___ 399 TTEEIKLDLEQQRDELNNVAAEIKDISEGLKEPELNNPTMPGSEDPTNDD 448
..|||.::|:::.:||:.::.|:.|:::.|.|.| |.|.||| .:.
BPUM_2856 392 NPEEIGINLDEETNELSQISIEMNDLADQLVEQE----TPPSSED--GEV 435
BSNT_04688___ 449 NTNNKNPTSGDQPTDGNDGSTDDSTQMNPEINNEADNQGQQNSSEKTNDL 498
..|::||...| .|.:|||:
BPUM_2856 436 GENDENPAQPD--------------------------TGSKNSSQ----- 454
BSNT_04688___ 499 NGKTETTAQSKAALRIIQLADENDGSQVDDSKNESDISIAKKRLNAAAEQ 548
|| |.|.:.:
BPUM_2856 455 ----------------------------DD-------------LKALSTR 463
BSNT_04688___ 549 IQKIEEELKEKQEEHNSKVEKRIEKLDKEIKDLNDKVDSLNIKINDLTSK 598
:.:::::::||...||.:::.::.::.||::.|..||:.|......|..:
BPUM_2856 464 LDEVKKKIQEKASAHNDELKDKVGQMSKELEKLTKKVEKLEKMFLWLQDR 513
BSNT_04688___ 599 FNDINDQFNKSSLLISEKEKEILKILRNNGEKDRLEQLSSVFTNTV---- 644
:|.|.::.......|..|.||: |.|...:...|.:.:
BPUM_2856 514 YNVIPNEIKSQESTILSKVKEL---------KRRNSPIGGAFNDNLFEKK 554
BSNT_04688___ 645 -DTKN--VSDLMKYYNYLYLYEKTLTGSLDVGSMSLLSRDAIQGQQGNVK 691
:||: ...||:|.|.|...|..:.......:.|.| ...::.|::
BPUM_2856 555 FETKSTRTKKLMEYSNQLSQLELMIANVYQPSNNSSL----YDTKEENIQ 600
BSNT_04688___ 692 SILALSPAESASWEALKNNTMQTDEDINSFIDGMTKFAGDYSGFIRDSQA 741
|||::...|:.:|:.||...:.:::|:::|||.|.||:..|:.:|...||
BPUM_2856 601 SILSIKKEETENWDTLKKQMLTSNDDVSTFIDEMQKFSDGYAEYISTQQA 650
BSNT_04688___ 742 GVLDELTKISESAAKASEQLVTGATQESATFSNDGLSGTMALSVQDTVGQ 791
.:..||..|||||...:||: |.|..|.::.|....::.:|.||::||
BPUM_2856 651 SMEQELNTISESADNVAEQM---ADQGDAVYTADLAGSSIVVSAQDSIGQ 697
BSNT_04688___ 792 EVLQMSDMMGSLSDRQSGIIDYTTNMQQSVNDVQAKADTLNNNWGKNVAS 841
|||::|:.|.||:|||.|:.|||.|:::||..||.||||||.||.|||.|
BPUM_2856 698 EVLRLSENMSSLTDRQKGVADYTNNIEESVTTVQEKADTLNENWSKNVHS 747
BSNT_04688___ 842 TKLVRNDVYGILGNTLVDGQNNGYVYDYLANPLKISGEVPEEKIQTVPPV 891
||||:.|:.|||||||.|..|:.|||::|||||||||:|||||.||||||
BPUM_2856 748 TKLVQQDLKGILGNTLSDQGNSNYVYNHLANPLKISGDVPEEKTQTVPPV 797
BSNT_04688___ 892 VILVIVLISSLLIGYFSSYYQNAPLLVKGALFGILNILVGLMISLFGLNI 941
|||:||:|||||||:|||||..||:|||||||||||:|||||||||||||
BPUM_2856 798 VILIIVMISSLLIGFFSSYYAAAPMLVKGALFGILNLLVGLMISLFGLNI 847
BSNT_04688___ 942 YSLPDDQTIKWSVFTILLLVASSAFIRTAFRFGSIPGWVASAAMILFYVA 991
|.|.|||.|:||:||||||||.||||||||.||||.||:|:.|:|.|:||
BPUM_2856 848 YKLADDQAIQWSIFTILLLVACSAFIRTAFLFGSIAGWMAATALIFFFVA 897
BSNT_04688___ 992 PLIDLIMPNFTFEDPVSKVYIDIQYGTGHLFTMGITVLLIITVIAVALPL 1041
|||||:||||.|.:||:.||:.||||.|..|.||:..|:|:||:.:.:|.
BPUM_2856 898 PLIDLVMPNFHFTNPVTDVYLSIQYGNGDHFGMGVIGLMILTVLFMVIPF 947
BSNT_04688___ 1042 IIRLMAEHTAESDETYEA 1059
:.:|..:.|.|.|.|:||
BPUM_2856 948 VTKLWKDKTEERDVTHEA 965
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