Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

Amino acid alignment: BSNT_04677 and BPUM_2849

See DNA alignment / Visit BSNT_04677 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:27
# Commandline: needle
#    -asequence pep-align/BSNT_04677___yueG.1.24716.seq
#    -bsequence pep-align/BPUM_2849___yueG2.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04677___yueG-BPUM_2849___yueG2.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04677___yueG-BPUM_2849___yueG2.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04677___yueG
# 2: BPUM_2849___yueG2
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 73
# Identity:      34/73 (46.6%)
# Similarity:    49/73 (67.1%)
# Gaps:           0/73 ( 0.0%)
# Score: 177.0
# 
#
#=======================================

BSNT_04677___      1 MPAIVGPIYIMSVTGNAAASFGDIFAISPKSVAHSGAGSGAFQLGDFVKI     50
                     ||||||||:|.|:.||.||:|||:.||:|.:|.||..|:|||..||::.:
BPUM_2849___y      1 MPAIVGPIHIESLGGNGAATFGDVLAIAPLAVDHSTGGAGAFNSGDYMSL     50

BSNT_04677___     51 NNQTSKTLFEDADITDETVSFNG     73
                     .:..:.|:..|..:..:..|||.
BPUM_2849___y     51 TSDPNATMLWDFTLFGQPQSFNA     73


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.