Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04664 and BPUM_2838

See DNA alignment / Visit BSNT_04664 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:26
# Commandline: needle
#    -asequence pep-align/BSNT_04664___comP.1.24716.seq
#    -bsequence pep-align/BPUM_2838___comP.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04664___comP-BPUM_2838___comP.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04664___comP-BPUM_2838___comP.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04664___comP
# 2: BPUM_2838___comP
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 773
# Identity:     439/773 (56.8%)
# Similarity:   580/773 (75.0%)
# Gaps:           8/773 ( 1.0%)
# Score: 2252.0
# 
#
#=======================================

BSNT_04664___      1 MYRYINVYKYLSLVFIILSFIYVIYLSYSFAFNIFVGADVKINEQGKLEV     50
                        ...:|..|:::.:|||||||||:||...|||||||.||.|..|:|||
BPUM_2838___c      1 ---MRKLYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEV     47

BSNT_04664___     51 TNVLDYTDEYYSCVKKGDIILEVNGEKGSDIQLKSGRLVNVESLIVERDN    100
                     .:|.::||.|.:.|:||||||||||.|....::|.|.|.||:||:|:|..
BPUM_2838___c     48 VDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEVKRGFLANVKSLVVDRHG     97

BSNT_04664___    101 KSFHLQNVSLISEENLFMYLIPVISYSICLFCIFFIYRINKVRKSTSAYI    150
                     ....|:||.|:|:.|||:||||||.|||||||||.|.::|||.:..||||
BPUM_2838___c     98 DKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKVNQKKSAYI    147

BSNT_04664___    151 LILFLLFVSVAYVSACGARRGEEISTYLLVLTLVSCPVLYIHFIYKYFIE    200
                     |.||||.||:.|||:.|:.:||.||..|:::|:.|.|.||:||:|:|..|
BPUM_2838___c    148 LALFLLAVSIGYVSSGGSGKGEAISRILVIVTMNSVPPLYMHFMYQYLKE    197

BSNT_04664___    201 LGTKLFEKKILIIMYMLPLINLLLEDVLSNRLKSSAFLSNLNLISFFVLV    250
                     |||::..:::|..:|::|:.|:||.....|:......|:.:||:|||||.
BPUM_2838___c    198 LGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNLLSFFVLA    247

BSNT_04664___    251 LTVSILIHKGIRKFKQKEQKSILKVLAYTNIFSFSPFIVFFAVPYVFFEK    300
                     ....|:..:..:|.|..|..::|:..|...|.|||||::||.:||.|...
BPUM_2838___c    248 FLSIIITIRAAKKLKDNEVSNVLRAFALILISSFSPFMLFFIIPYFFGIY    297

BSNT_04664___    301 YVSPFSLAAFTLVIPFSLVYQFMTNRLYNIDFVVGRLKYYGFLAITPTII    350
                     ::||:.:|:|.|:|||.||||||:|:|||:||.:||:||||||||||||:
BPUM_2838___c    298 FISPYVVASFVLLIPFFLVYQFMSNKLYNVDFFMGRIKYYGFLAITPTIL    347

BSNT_04664___    351 VVTIFNYIQQPKDIFYLVKLTIAIYVLMFAVFYFKEIIDFRFKLKRFTEK    400
                     ||.:|:::|:|...||.||.||..|:||..||||||||||||:||||:||
BPUM_2838___c    348 VVVVFDFLQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEK    397

BSNT_04664___    401 FNYQDGIFKFTQLIKQASSVDQVLNHFKNTILEVLNIDNACVYD-NSKGE    449
                     .||||.:|||||||::|||:.|||.|.|.||||||.::.|.|.: .:.|:
BPUM_2838___c    398 HNYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQ    447

BSNT_04664___    450 ITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKEFKQGFIIKIGERGDRSF    499
                     |..:.::..:...:|::....::..|::|||....:||::||||||..||
BPUM_2838___c    448 IVEIDESIEESQLWKDYVDQFQDILGEVGKIIALDKGFMMKIGERGGHSF    497

BSNT_04664___    500 LVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQ    549
                     ::.|.|:..|.|||||||:||:||||||:||||||:||||||.|||||||
BPUM_2838___c    498 VICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQ    547

BSNT_04664___    550 QESNPVWLKKLMYTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFK    599
                     :|:||.||||:|:.:||||||||||||||||||||||||||.|:||.:|:
BPUM_2838___c    548 REANPAWLKKVMFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQ    597

BSNT_04664___    600 KGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLVKALS    649
                       ::.|...::..|:..|||||.||..|||||||||||||||||||||:|
BPUM_2838___c    598 --NDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYDLGLVKAIS    645

BSNT_04664___    650 KLVAQQQERVPFHIRLNTGRFTASL--DLDSQLNLYRIIQEFLSNAVKHS    697
                     ||.:|.||..||||||||.||...|  |:|||||:|||:||.||||:|||
BPUM_2838___c    646 KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHS    695

BSNT_04664___    698 QATDVLIMLISIQNKIVLHYEDDGVGFDQEKNTEHSMSMGLSGIKERVRA    747
                     ||:.||:|||.|::::||||||||||||.....:|:||||||||:|||:|
BPUM_2838___c    696 QASQVLVMLICIKDQVVLHYEDDGVGFDARHLDQHTMSMGLSGIRERVKA    745

BSNT_04664___    748 LDGRLRIETSEGKGFKADIEIEL    770
                     |:|:|.|.|:..||.|..||:||
BPUM_2838___c    746 LNGKLHIHTAPEKGLKVKIEMEL    768


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

Amino acid alignment: BSNT_04664 and BPUM_2838

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
