Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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Amino acid alignment: BSNT_04628 and BPUM_2809

See DNA alignment / Visit BSNT_04628 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:25:21
# Commandline: needle
#    -asequence pep-align/BSNT_04628___yugF.1.24716.seq
#    -bsequence pep-align/BPUM_2809.2.24716.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile pep-align/BSNT_04628___yugF-BPUM_2809.aln
# Align_format: srspair
# Report_file: pep-align/BSNT_04628___yugF-BPUM_2809.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04628___yugF
# 2: BPUM_2809
# Matrix: EBLOSUM62
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 274
# Identity:     158/274 (57.7%)
# Similarity:   216/274 (78.8%)
# Gaps:           1/274 ( 0.4%)
# Score: 893.0
# 
#
#=======================================

BSNT_04628___      1 MEAVSPIRRFTVDGVNVYYEHYQNPGRQTLVCVHGFLSSAFSFRKVIPLL     50
                     |:.|.|....:..|:::|||||.|.|::||:.:||..||.||:||:||||
BPUM_2809          1 MDIVQPAYMKSKFGLDIYYEHYPNQGKKTLILIHGLFSSTFSYRKLIPLL     50

BSNT_04628___     51 RDKYDIIALDLPPFGQSEKSRTFIYTYQNLAKLVIGILEHLQVKQAVLVG    100
                     :..:::||:|||||||||||.||||:|:|:||::|.:..:||::.|:|||
BPUM_2809         51 KQDFNLIAIDLPPFGQSEKSNTFIYSYRNMAKIIIELASYLQIQHAILVG    100

BSNT_04628___    101 HSMGGQISLSAALQKPELFSKVVLLCSSGYLKRSHPTIIFGTHIPYFHLY    150
                     |||||||:|.||.::|:||.|.||||||||:.:|..::::.|:||||:||
BPUM_2809        101 HSMGGQIALYAASERPDLFEKAVLLCSSGYMNKSKKSLVYSTYIPYFYLY    150

BSNT_04628___    151 IKRWLSKEGVMKNLLNVVHDKSLIDEEMIDGYGRPFQDEQIFKAMTRFIR    200
                     :||.|.|:|:||||..||||.|:||:||:|||.:||.|:|||:.:.|.||
BPUM_2809        151 LKRKLFKQGIMKNLTAVVHDHSIIDQEMVDGYLKPFSDDQIFRGIFRLIR    200

BSNT_04628___    201 HREGDLEPEQLKKMNKPALLIWGEEDRIVPMEIGKRLHADLPNSVLYSLG    250
                     ||||||..:.||||..|.||||||||||||::||:|||.|||:|..::|.
BPUM_2809        201 HREGDLASDVLKKMETPVLLIWGEEDRIVPIQIGERLHKDLPHSTFHALK    250

BSNT_04628___    251 QTGHLVPEERPELVSEHIADFIN-    273
                     :||||:|||.|..||:.|..|.. 
BPUM_2809        251 KTGHLIPEENPVFVSDQIGHFSLS    274


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